“…54 Public domain databases (Japanese JSNP, http://snp.ims.utokyo.ac.jp, NCBI's dbSNP, http://www.ncbi.nlm.nih.-gov/SNP/) and SNPSelector 55 were used to identify SNPs from the following five plausible MS candidate genes that were located 260 kb centromeric and 120 kb telomeric of APOE: PVR (poliovirus receptor, MIM 173850), CBLC (Cas-Br-M (murine) ecotropic retroviral transforming sequence c, MIM 608453), PVRL2 (polio- 56,57 CBLC and RELB were selected because they are believed to regulate the NF-kB cascade, which has previously been implicated in MS, [58][59][60] and PVR and PVRL2 were of particular interest because viral infections have long been suspected to be environmental triggers of MS. 43,[61][62][63] Genotype data from the HapMap project (http:// www.hapmap.org) were used for SNP validation and for visual inspection of the LD structure in this region of the genome. All SNP genotypes, including the two SNPs in exon 4 of the APOE gene that define the three functional APOE alleles commonly referred to as e2, e3 and e4, were generated by the TaqMan allelic discrimination assay on an ABI7900HT genotyping platform.…”