Pokeweed antiviral protein (PAP) is a ribosome-inactivating protein isolated from the pokeweed plant (Phytolacca americana) that inhibits the proliferation of several plant and animal viruses. We have shown previously that PAP and nontoxic mutants of PAP can directly depurinate brome mosaic virus (BMV) RNA in vitro, resulting in reduced viral protein translation. Here we expand on these initial studies and, using a barley protoplast system, demonstrate that recombinant PAP and nontoxic mutants isolated from E. coli are able to reduce the accumulation of BMV RNAs in vivo. Pretreatment of only BMV RNA3 with PAP prior to transfection of barley protoplasts reduced the accumulation of all BMV RNAs, with a more severe effect on subgenomic RNA4 levels. Using in vitro RNA synthesis assays, we show that a depurinated template causes the BMV replicase to stall at the template nucleotide adjacent to the missing base. These results provide new insight into the antiviral mechanism of PAP, namely that PAP depurination of BMV RNA impedes both RNA replication and subgenomic RNA transcription. These novel activities are distinct from the PAP-induced reduction of viral RNA translation and represent new targets for the inhibition of viral infection.
Pokeweed antiviral protein (PAP)1 is a 29-kDa ribosomeinactivating protein of the pokeweed plant Phytolacca americana. Since its initial description as an antiviral agent against tobacco mosaic virus (1), PAP has been demonstrated to reduce the propagation of several plant and animal viruses, including potato virus X, HIV, and influenza (2-4). It therefore holds promise as a broad-spectrum antiviral agent.Years after its initial discovery, the enzymatic activity of PAP was characterized as an N-glycosylase (5). Like all ribosome-inactivating proteins, PAP efficiently removes a conserved adenine from the sarcin/ricin loop within domain VI of the large ribosomal RNA (6, 7). This depurination slows the elongation step of protein synthesis and is considered to be the reason for cytotoxicity of the protein (reviewed in Refs. 8 and 9).The accompanying decline in cellular protein translation may cause local cell death and limit virus propagation (10). This model is supported by observations showing a positive correlation between ribosome depurination and inhibition of virus infection (11). The accompanying decline in cellular protein translation, as a result of depurination, is often cited as the cause of antiviral activity. For example, reduction of poliovirus infection of HeLa cells incubated with PAP was attributed to inhibition of translation in virus-infected cells (12). In addition, inhibition of tobacco mosaic virus multiplication in tobacco protoplasts correlated well with PAP-mediated inhibition of translation (13).More recent results have revealed that many ribosome-inactivating proteins are capable of depurinating RNA substrates apart from the rRNA (14 -16). Rajamohan et al. (17) showed that PAP removes both adenines and guanines from HIV-1 when incubated in vitro with the genomic...