In many natural and artificial devices diffusive transport takes place in confined geometries with corrugated boundaries. Such boundaries cause both entropic and hydrodynamic effects, which have been studied only for the case of spherical particles. Here we experimentally investigate diffusion of particles of elongated shape confined into a corrugated quasi-two-dimensional channel. Elongated shape causes complex excluded-volume interactions between particle and channel walls which reduce the accessible configuration space and lead to novel entropic free energy effects. The extra rotational degree of freedom also gives rise to a complex diffusivity matrix that depends on both the particle location and its orientation. We further show how to extend the standard Fick-Jacobs theory to incorporate combined hydrodynamic and entropic effects, so as, for instance, to accurately predict experimentally measured mean first passage times along the channel. Our approach can be used as a generic method to describe translational diffusion of anisotropic particles in corrugated channels.1 Diffusive transport through micro-structures such as occurring in porous media [1,2], micro/nano-fluidic channels [3][4][5][6][7] and living tissues [8,9], is ubiquitous and attracts evergrowing attention from physicists [10,11], mathematicians [12], engineers [1], and biologists [8,9,13]. A common feature of these systems are confining boundaries of irregular shapes.Spatial confinement can fundamentally change equilibrium and dynamical properties of a system by both limiting the configuration space accessible to its diffusing components [10] and increasing the hydrodynamic drag [14] on them.An archetypal model to study confinement effects consists of a spherical particle diffusing in a corrugated narrow channel, which mimics directed ionic channels [15], zeolites [16], and nanopores [17]. In this context, Jacobs [18] and Zwanzig [19] proposed a theoretical formulation to account for the entropic effects stemming from constrained transverse diffusion. Focusing on the transport (channel) direction, they assumed that the transverse degrees of freedom (d.o.f's) equilibrate sufficiently fast and can, therefore, be eliminated adiabatically by means of an approximate projection scheme. In first order, they derived a reduced diffusion equation in the channel direction, known as the Fick-Jacobs (FJ) equation.Numerical investigations [11,[20][21][22][23] demonstrated that the FJ equation provides a useful tool to accurately estimate the entropic effects for confined pointlike particles. However, our recent experiments [5] evidentiated that hydrodynamic effects for finite size particles cannot be disregarded if the channel and particle dimensions grow comparable. In order to incorporate such hydrodynamic corrections, the FJ equation must then be amended in terms of the experimentally measured particle diffusivity.Previous studies on confined diffusion focused mostly on spherical particles, for which only the translational d.o.f's were considered. However...