Abstract:We extend the Landauer-Büttiker probe formalism for conductances to the high bias regime, and study the effects of environmentally-induced elastic and inelastic scattering on charge current in single molecule junctions, focusing on high-bias effects. The probe technique phenomenologically incorporates incoherent elastic and inelastic effects to the fully coherent case, mimicking a rich physical environment at trivial cost. We further identify environmentally-induced mechanisms which generate an asymmetry in th… Show more
“…Here, we use an alternative, low-cost technique and account for system-environment interactions by employing the Landauer-Büttiker probe method [27,28]. It is applicable for the study of charge conduction in a wide range of systems, from single-atom point contacts up to the thermodynamic limit [19,[29][30][31][32][33][34][35][36][37][38][39][40][41][42][43]65]. In this technique, incoherent elastic and inelastic electron (or hole) scattering effects are taken into account by augmenting the non-interacting electronic Hamiltonian with probe terminals through which charge carriers loose their phase memory and possibly exchange energy with other degrees of freedom.…”
Charge transfer can take place along double helical DNA over distances as long as 30 nanometers. However, given the active role of the thermal environment surrounding charge carriers in DNA, physical mechanisms driving the transfer process are highly debated. Moreover, the overall potential of DNA to act as a conducting material in nanoelectronic circuits is questionable. Here, we identify key principles in DNA nanoelectronics by performing an exhaustive computational study. The electronic structure of double-stranded DNA is described with a coarse-grained model. The dynamics of the molecular system and its environment is taken into account using a quantum scattering method, mimicking incoherent, elastic and inelastic effects. By analyzing all possible sequences with 3 to 7 base pairs, we identify fundamental principles in DNA nanoelectronics: The environment crucially influences the electrical conductance of DNA, and the majority of sequences conduct via a mixed, coherent-incoherent mechanism. Likewise, the metal-molecule coupling and the gateway states play significant roles in the transport behavior. While most sequences analyzed here are exposed to be rather poor electrical conductors, we identify exceptional DNA molecules, which we predict to be excellent and robust conductors of electric current over a wide range of physical conditions.
“…Here, we use an alternative, low-cost technique and account for system-environment interactions by employing the Landauer-Büttiker probe method [27,28]. It is applicable for the study of charge conduction in a wide range of systems, from single-atom point contacts up to the thermodynamic limit [19,[29][30][31][32][33][34][35][36][37][38][39][40][41][42][43]65]. In this technique, incoherent elastic and inelastic electron (or hole) scattering effects are taken into account by augmenting the non-interacting electronic Hamiltonian with probe terminals through which charge carriers loose their phase memory and possibly exchange energy with other degrees of freedom.…”
Charge transfer can take place along double helical DNA over distances as long as 30 nanometers. However, given the active role of the thermal environment surrounding charge carriers in DNA, physical mechanisms driving the transfer process are highly debated. Moreover, the overall potential of DNA to act as a conducting material in nanoelectronic circuits is questionable. Here, we identify key principles in DNA nanoelectronics by performing an exhaustive computational study. The electronic structure of double-stranded DNA is described with a coarse-grained model. The dynamics of the molecular system and its environment is taken into account using a quantum scattering method, mimicking incoherent, elastic and inelastic effects. By analyzing all possible sequences with 3 to 7 base pairs, we identify fundamental principles in DNA nanoelectronics: The environment crucially influences the electrical conductance of DNA, and the majority of sequences conduct via a mixed, coherent-incoherent mechanism. Likewise, the metal-molecule coupling and the gateway states play significant roles in the transport behavior. While most sequences analyzed here are exposed to be rather poor electrical conductors, we identify exceptional DNA molecules, which we predict to be excellent and robust conductors of electric current over a wide range of physical conditions.
“…In Refs. 41,42 , we further used the LBP technique to simulate high-bias voltage effects, specifically, the role of environmental interactions on the operation of a molecular junction as a diode.…”
The electrical conductance of molecular junctions may strongly depend on the temperature, and weakly on molecular length, under two distinct mechanisms: phase-coherent resonant conduction, with charges proceeding via delocalized molecular orbitals, and incoherent thermally-assisted multi-step hopping. While in the case of coherent conduction the temperature dependence arises from the broadening of the Fermi distribution in the metal electrodes, in the latter case it corresponds to electron-vibration interaction effects on the junction. With the objective to distill the thermally-activated hopping component, thus expose intrinsic electron-vibration interaction phenomena on the junction, we suggest the design of molecular junctions with "spacers", extended anchoring groups that act to filter out phase-coherent resonant electrons. Specifically, we study the electrical conductance of fixed-gap and variable-gap junctions that include a tunneling block, with spacers at the boundaries. Using numerical simulations and analytical considerations, we demonstrate that in our design, resonant conduction is suppressed. As a result, the electrical conductance is dominated by two (rather than three) mechanisms: superexchange (deep tunneling), and multi-step thermally-induced hopping. We further exemplify our analysis on DNA junctions with an A:T block serving as a tunneling barrier. Here, we show that the electrical conductance is insensitive to the number of G:C base-pairs at the boundaries. This indicates that the tunneling-to-hopping crossover revealed in such sequences truly corresponds to the properties of the A:T barrier.
“…In Refs. 58,59 , we further used the LBP technique to simulate high-bias voltage effects, specifically the role of environmental interactions on the diode operation. More recently, we demonstrated that the LBP method can uncover an intermediate quantum coherent-incoherent transport regime in DNA junctions 60 .…”
We study the electrical conductance G and the thermopower S of single-molecule junctions, and reveal signatures of different transport mechanisms: off-resonant tunneling, on-resonant coherent (ballistic) motion, and multi-step hopping. These mechanisms are identified by studying the behavior of G and S while varying molecular length and temperature. Based on a simple one-dimensional model for molecular junctions, we derive approximate expressions for the thermopower in these different regimes. Analytical results are compared to numerical simulations, performed using a variant of Büttiker's probe technique, the so-called voltagetemperature probe, which allows us to phenomenologically introduce environmentally-induced elastic and inelastic electron scattering effects, while applying both voltage and temperature biases across the junction. We further simulate the thermopower of GC-rich DNA molecules with mediating A:T blocks, and manifest the tunneling-to-hopping crossover in both the electrical conductance and the thermopower, in accord with measurements by Y. Li et al., Nature Comm. 7, 11294 (2016).
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