2020
DOI: 10.1080/22221751.2020.1718554
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Incorporation of information diffusion model for enhancing analyses in HIV molecular surveillance

Abstract: Molecular surveillance of infections is essential in monitoring their transmission in the population. In this study, newly diagnosed HIV patients' phylogenetic, clinical and behavioural data were integrated, and an information diffusion model was incorporated in analysing transmission dynamics. A genetic network was constructed from HIV sequences, from which transmission cascades were extracted. From the transmission cascades, CRF01_AE had higher values of information diffusion metrics, including scale, speed … Show more

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Cited by 12 publications
(4 citation statements)
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“…The positive association between longer lags and acute HCV diagnosis confirmed with this observation. As they also served at important positions in a transmission network (20), more frequent HCV testing among this group of patients is warranted for detecting the infection early to control the spread of HCV among MSM living with HIV.…”
Section: Discussionmentioning
confidence: 99%
“…The positive association between longer lags and acute HCV diagnosis confirmed with this observation. As they also served at important positions in a transmission network (20), more frequent HCV testing among this group of patients is warranted for detecting the infection early to control the spread of HCV among MSM living with HIV.…”
Section: Discussionmentioning
confidence: 99%
“…This was a prospective parallel-group open-label randomized controlled study. The study was conducted in Hong Kong, where MSM accounted for a majority of new HIV infections in the past decade [ 17 ]. Through a social network approach, enrolled eligible participants were men who ever had sex with other men, who were aged 18 years or above, and who were either referred by another participant in the study or recruited by the research team as seeds.…”
Section: Methodsmentioning
confidence: 99%
“…Zhan et al in [9] analyzed the process of virus propagation both in real world and on the Internet, then constructed a nonlinear model based on the SIS model to explore the coupling effect. Kwan et al integrated newly diagnosed HIV patients' phylogenetic, clinical and behavioral data, and incorporated an information diffusion model to analyze transmission dynamics [10].…”
Section: Related Workmentioning
confidence: 99%