Previous studies from our laboratory established that in Escherichia coli, glycogen synthesis is regulated by both the relA gene, which mediates the stringent response, and by cyclic AMP. However, those studies raised the question of whether this dual regulatory system functions in an independent or a dependent manner. We show here that this regulation is independent, i.e., each regulatory process can express its action in the absence of the other. Triggering the stringent response by amino acid starvation increased glycogen synthesis even in mutants lacking the ability to synthesize cyclic AMP or lacking cyclic AMP receptor protein; and cyclic AMP addition stimulated glycogen synthesis in relA mutant strains. We also show that physiological concentrations of GTP inhibit ADP-glucose synthetase (glucose-i-phosphate adenylyltransferase, EC 2.7.7.27), the rate-limiting enzyme of bacterial glycogen synthesis, in vitro. Because the stringent response is known to cause an abrupt decrease in the cellular level of GTP, modulation of ADP-glucose synthetase activity by this nucleotide could account for a substantial portion of the step-up in the cellular rate of glycogen synthesis observed when the stringent response is triggered.The relA gene mediates the stringent response to amino acid starvation in Escherichia coli cells (6). This gene is required for glycogen to accumulate during amino acid starvation when the cells are using glucose (5, 25, 33), but not when the cells are using glycerol (25), as the source of carbon. Because the cellular level of cyclic 3',5'-AMP is high during growth on glycerol but low during growth on glucose (15), we suggested that high cellular levels of cyclic AMP can replace the relA gene requirement for glycogen accumulation in amino acid starvation (25). This suggestion is supported by other work from our laboratory (24) showing that the cellular level of glycogen increases as cellular cyclic AMP increases. Based on these studies, it appears that glycogen synthesis, like a number of other metabolic processes in E. coli, is subject to dual control by relA gene function and by cyclic AMP.The phenomenon of dual control by the relA gene and cyclic AMP and the question of whether these two controls act independently has intrigued investigators for some time. To date, studies on induction of acetohydroxy acid synthase (18), tryptophanase (35), P-galactosidase (30,31), and ribulokinase (36) have not answered this question. In contrast, the studies presented here provide strong evidence that the dual controls of glycogen synthesis by cyclic AMP and by the relA gene are independent.When the stringent response is triggered, growth slows and cellular glycogen accumulation increases (5,25,33). However, this accumulation does not necessarily indicate that the cellular rate of glycogen synthesis has increased, because cellular glycogen will accumulate even when the cellular rate of glycogen synthesis decreases, if growth is slowed to a greater degree than glycogen synthesis. This report shows that the gly...