2015
DOI: 10.1016/j.jff.2015.06.016
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In silico investigation of action mechanism of four novel angiotensin-I converting enzyme inhibitory peptides modified with Trp

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Cited by 16 publications
(8 citation statements)
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“…C score, as a synthetic scoring function was used for screening the binding affinity of ligand bound to ACE. As shown in Table 4, the Total score and C score of lisinopril were 11.24 and 4, respectively, which was in accordance with the results of the report basically [38]. Three peptides (AGALGDSVTVTR, HIITLGR, GHIITVAR) had the same highest C scores as lisinopril, whereas the C scores of the other peptides were below 4 ( Table S1), suggesting that these peptides had stronger binding affinity with ACE.…”
Section: Molecular Docking Simulation Between Peptide and Acesupporting
confidence: 87%
See 1 more Smart Citation
“…C score, as a synthetic scoring function was used for screening the binding affinity of ligand bound to ACE. As shown in Table 4, the Total score and C score of lisinopril were 11.24 and 4, respectively, which was in accordance with the results of the report basically [38]. Three peptides (AGALGDSVTVTR, HIITLGR, GHIITVAR) had the same highest C scores as lisinopril, whereas the C scores of the other peptides were below 4 ( Table S1), suggesting that these peptides had stronger binding affinity with ACE.…”
Section: Molecular Docking Simulation Between Peptide and Acesupporting
confidence: 87%
“…Then the polar hydrogens were added to the ACE model. The number of poses per ligand was set to 20 to perform the molecular docking and the conformations for each peptide based on Total scores of Surflex-Dock were ranked [38]. The conformations of ranked No.…”
Section: Molecular Docking Simulation Between Peptide and Acementioning
confidence: 99%
“…It is consistent with other observations that hydrophobic peptides may contribute to more ACE inhibitory activity more than hydrophilic ones. 28 This would provide further evidence by using peptide sequence identification.…”
Section: ■ Materials and Methodsmentioning
confidence: 99%
“…We imported conformation 1 of the ACE/inhibitor (GAMVVH or lisinopril) complex into GRO-MACS software to adjust its conformation for ligand binding by using molecular dynamics simulation. 28 Backbone root-mean-square deviations (RMSD) were used to assess the conformation changes of ACE/inhibitor complexes during the molecular dynamics simulation. Figure S3 shows RMSD as a function of simulation time for the ACE/inhibitor complexes.…”
Section: ■ Materials and Methodsmentioning
confidence: 99%
“…Involvement of W in the in vitro ACE inhibitory activity of peptides seems clear from QSAR and docking studies. In particular, the relevance of W at the C-terminal end of peptides was proven as a successful rationale for the design of novel tripeptides with improved bioactivity [40]. Novel rationally designed tripeptides of sequences VKW, YAW, KYW and TAW, derived from the dipeptides VK, YA, KY and the tripeptide TAY identified from an oyster hydrolysate [49], increased their potency 27–1450 times compared to their corresponding parental sequences [40].…”
Section: Structural Requirements Of Bioactive Peptidesmentioning
confidence: 99%