SummaryA three-dimensional 1 H chemical shift/ 1 H-15 N dipolar coupling/ 15 N chemical shift correlation spectrum was obtained on a sample of specifically 15 N-labeled magainin peptides oriented in lipid bilayers between glass plates in a flat-coil probe. The spectrum showed complete resolution of the resonances from two labeled amide sites in all three dimensions. The three orientationally dependent frequencies associated with each resonance enabled the orientation of the peptide planes to be determined relative to the direction of the applied magnetic field. These results demonstrate the feasibility of multiple-pulse spectroscopy in a flat-coil probe, the ability to measure three spectral parameters from each site in a single experiment, and the potential for resolving among many labeled sites in oriented membrane proteins.
KeywordsSolid-state NMR; Magainin; Membranes; Oriented samples; Structure determination Solid-state NMR spectroscopy of macroscopically oriented systems is a particularly appealing approach to the structural characterization of peptides and proteins associated with bilayer membranes (Cross and Opella, 1994), since their three-dimensional structures are intimately related to the highly ordered and anisotropic environment of phospholipid bilayers, and suitable well-oriented samples can be prepared for these compounds. Orientationally dependent spectral parameters are measured and then interpreted in terms of the angles between the individual bonds and the direction of the applied magnetic field. Generally, this has been accomplished using specifically labeled samples, where the spectral parameters from one or, at most, a few sites are measured in each experiment . The implemenuation of three-and four-dimensional solid-state NMR experiments (Ramamoorthy et al., 1995a,b) in Structural studies of oriented membrane samples is attractive, because it gives opportunities for resolving among multiple overlapping resonances and for measuring multiple spectral parameters from experiments on uniformly labeled peptides and proteins.In this communication we describe the application of a recently developed threedimensional solid-state NMR experiment (Ramamoorthy et al., 1995a)
NIH-PA Author ManuscriptNIH-PA Author Manuscript NIH-PA Author Manuscript resulting 3D spectrum is characterized by three frequencies that can be analyzed by the graphical restriction plot method to yield the orientations of the individual peptide planes, which can then be assembled to form the polypeptide structure . The spectrum also demonstrates the potential for resolution among resonances from multiple sites in uniformly labeled proteins. An important technical finding is that a flat-coil probe has adequate rf homogeneity for multiple-pulse line narrowing of 1 H resonances.The samples used for these studies consisted of specifically 15 N-labeled magainin2 peptides in hydrated phospholipid bilayers oriented between glass plates. The magainins are a family of 21-26-residue amphipathic helical peptides, found originally in frog...