Abstract:We introduced an efficient initial guess method, namely the grid-cutting, which is specialized for grid-based density functional theory (DFT) calculations. It produces initial density and orbitals through pre-DFT calculations in an inner simulation box made by cutting out the outer region of a full-size one. To assess its performance, we carried out DFT calculations for small molecules included in the G2-1 set and two large molecules with various combinations of mixing and diagonalization conditions, relative … Show more
“…The flake size was increased by repeating the unit cell geometry. The actual adsorption energy on the GDY flake was calculated using our in-house grid-based code, ACE-Molecule, ,− for direct comparison with the results of VASP, because ACE-Molecule also employs the projector augmented wave (PAW) method for core electrons like VASP. In addition, it supports an accelerated LC-ωPBE method for the efficient hybrid DFT calculation of large GDY flakes.…”
Promising applications of graphdiyne have often been initiated by theoretical predictions especially using DFT known as the most powerful first-principles electronic structure calculation method. However, there is no systematic study on the reliability of DFT for the prediction of the electronic properties of the graphdiyne. Here, we performed a study of Li adsorption on the graphdiyne using hybrid DFT with LC-ωPBE and compared the results with those of PBE, because accurate prediction of the Li adsorption is important for performance as a Li storage that was first theoretically suggested and then experimentally realized. Our results show that PBE overestimates the adsorption energy inside a pore and the barrier height at the transition state of in-plane diffusion compared to the those of LC-ωPBE. In particular, LC-ωPBE predicted almost barrier-less in-plane diffusion of Li on the graphdiyne because of the presence of both in-plane and out-of-plane π orbitals. Also, LC-ωPBE favors a high spin state due to the exact exchange energy when several Li atoms are adsorbed on the graphdiyne, whereas PBE favors a low spin state. Thus, the use of the hybrid DFT is critical for reliable predictions on the electronic properties of the graphdiyne.
“…The flake size was increased by repeating the unit cell geometry. The actual adsorption energy on the GDY flake was calculated using our in-house grid-based code, ACE-Molecule, ,− for direct comparison with the results of VASP, because ACE-Molecule also employs the projector augmented wave (PAW) method for core electrons like VASP. In addition, it supports an accelerated LC-ωPBE method for the efficient hybrid DFT calculation of large GDY flakes.…”
Promising applications of graphdiyne have often been initiated by theoretical predictions especially using DFT known as the most powerful first-principles electronic structure calculation method. However, there is no systematic study on the reliability of DFT for the prediction of the electronic properties of the graphdiyne. Here, we performed a study of Li adsorption on the graphdiyne using hybrid DFT with LC-ωPBE and compared the results with those of PBE, because accurate prediction of the Li adsorption is important for performance as a Li storage that was first theoretically suggested and then experimentally realized. Our results show that PBE overestimates the adsorption energy inside a pore and the barrier height at the transition state of in-plane diffusion compared to the those of LC-ωPBE. In particular, LC-ωPBE predicted almost barrier-less in-plane diffusion of Li on the graphdiyne because of the presence of both in-plane and out-of-plane π orbitals. Also, LC-ωPBE favors a high spin state due to the exact exchange energy when several Li atoms are adsorbed on the graphdiyne, whereas PBE favors a low spin state. Thus, the use of the hybrid DFT is critical for reliable predictions on the electronic properties of the graphdiyne.
“…Based on the previous findings of Green [31], Amat and Card o-Dorca [32], and Nazari and Whitten [33], Lehtola used the superposition of precalculated effective atomic potentials for the initial guess of the Fock operator to design a convenient alternative of SAD for real-space calculations [14,34], and new tunable atomic potentials are proposed by Laikov and Briling [35]. Lee et al investigated the application of the EHT in the grid-based real-space techniques [36], while Lim and coworkers utilized a multi-grid approach [37] which has some similarities with the multiple-step, projection-based techniques of atom-centered Gaussian basis sets. Jansík et al employed a projection-free multilevel approach [30,38], where the initial density of a target basis set is obtained by a three-step procedure which utilized the configurationaveraged SAD method with a specially-derived minimal AO basis set calculation.…”
A new multilevel approach is presented to the initial guess for self-consistent field (SCF) calculations, which combines the superposition of atomic densities (SAD) procedure and the density matrix of a semi-empirical quantum mechanics (SQM) calculation through projection. The proposed initial guess method produces a polarized, spin-specific initial density, while its computational costs are a few orders of magnitude lower than the expenses of a scheme that projects the density matrix of a standard quantum chemical calculation utilizing a minimal AO basis set (pMIN). The projected SQM density-based (pSQM) technique is thoroughly tested using the GFN2-xTB approach, and its efficiency and reliability are compared with those of the standard SAD and density matrix projection techniques. The results indicate that the calculations using the pSQM scheme require somewhat fewer SCF iteration steps compared with the SAD method, however, the SAD, the pSQM, and the pMIN techniques have similar performance.
“…Orbital optimization is usually the simpler, the closer the initial guess is to the converged result. However, despite its pronounced importance, the choice of initial orbitals has attracted surprisingly little interest in the literature. − (Note that although the optimization problem can also be reformulated only in terms of density matrices in the case of HF and KS theory, this has no implications for the present study, as the two approaches are equivalent. )…”
Section: Introductionmentioning
confidence: 99%
“…In addition to the aforementioned approaches, calculations may be initialized recursively by reading in a converged density computed in a smaller basis set. Such a procedure has recently been advocated for real-space calculations; the use of confinement potentials has also been found to help SCF convergence in the case of extended real-space basis sets . In some cases it is also possible to decompose the system into either single molecules or chemically meaningful molecular fragments, ,, and “glue” the orbitals together to form a good guess density for the original calculation.…”
Electronic structure
calculations, such as in the Hartree–Fock
or Kohn–Sham density functional approach, require an initial
guess for the molecular orbitals. The quality of the initial guess
has a significant impact on the speed of convergence of the self-consistent
field (SCF) procedure. Popular choices for the initial guess include
the one-electron guess from the core Hamiltonian, the extended Hückel
method, and the superposition of atomic densities (SAD). Here, we
discuss alternative guesses obtained from the superposition of atomic
potentials (SAP), which is easily implementable even in real-space
calculations. We also discuss a variant of SAD which produces guess
orbitals by purification of the density matrix that could also be
used in real-space calculations, as well as a parameter-free variant
of the extended Hückel method, which resembles the SAP method
and is easy to implement on top of existing SAD infrastructure. The
performance of the core Hamiltonian, the SAD, and the SAP guesses
as well as the extended Hückel variant is assessed in nonrelativistic
calculations on a data set of 259 molecules ranging from the first
to the fourth periods by projecting the guess orbitals onto precomputed,
converged SCF solutions in single- to triple-ζ basis sets. It
is shown that the proposed SAP guess is the best guess on average.
The extended Hückel guess offers a good alternative, with less
scatter in accuracy.
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