Sepsis is systemic response to infection with bacteria, viruses, fungi, protozoa, or rickettsiae. If not recognized and treated early, the progression from sepsis to severe sepsis, septic shock, and multiple organ dysfunction syndrome (MODS) are seen (1).Although pharmacologic, laboratory, and surgical advances have improved the outcomes of many infections, the mortality of sepsis and septic shock is high. The incidence of sepsis is more than 500,000 cases each year in the United States. The mortality rate is between 30% and 80% (2). Severe sepsis is a primary cause of death, especially in intensive care units.The systemic inflammatory response to infection (systemic inflammatory response syndrome-SIRS) is a complex situation (3). At the beginning of infection, pathogen-associated microbial patterns (PAMPs) are recognized by pattern recognition receptors (PRRs-cellular receptors expressed on extracellular membranes) and NF-kappa B (NF-KB) release. NF-KB is an important intracellular protein and translocated to the nucleus then the gene transcription of proinflammatory (tumor necrosis factor-α [TNF-α], interleukin [IL]-1, interleukin-6 [IL-6] and anti-inflammatory [IL-10] cytokines) (4). They trigger many physiologic responses such as stimulation of polymorphonuclear neutrophils, stimulation of the kallikrein-kinin system, activation of factor XII and extrinsic pathway, production of tissue factor (TF), and the activation of coagulation cascade and the complement system (5).Why do some children show mild clinical symptoms against infectious agents and others die within a few hours?Genetic epidemiologic studies suggest that variations in host genetic factors influence the outcome of sepsis (3,6-9). Several genetic polymorphisms have been identified in patients with sepsis and septic shock, including the TNF-α and TNF-β genes, the IL-1 family, the IL-6, the IL-10, the CD-14, the angiotensin-converting enzyme, Summary: Several genetic polymorphisms have been identified in patients with sepsis and severe sepsis, such as the tumor necrosis factor-α (TNF-α) and TNF-β genes, the interleukin-1 (IL-1) family, the IL-6, the IL-10, the CD-14, the Toll-like receptors, plasminogen activator inhibitor type 1, and the factor V 1691G-A mutations. In this study, the relationship between the TNF-α 308G/A, the IL-6-174 G/C, the PAI-1, the FVL, the EPCR, and the Cathepsin G (Ars 125Ser) polymorphisms and the development and outcome of sepsis in pediatric patients was studied. TNF-α 308 G/A, PAI-1 4G/4G, and EPCR mutations influence the risk of severe sepsis in children. IL-6 174 G/C, FVL, and Cathepsin G (Ars 125 Ser) did not influence the incidence and mortality of severe sepsis.