ABSTRACT:The sensing response of 15-crown-5-ether functionalized polythiophene to Li + , Na + , and K + has been investigated at the atomistic level using molecular dynamics simulations. The stability associated with all the identified binding sites has been corroborated by quantum mechanical calculations. Although the cavity of the macrocycle is not the most visited binding site, such receptor is responsible of the selective sensing response of this polythiophene derivative. PF 6 − counterions reduce the mobility of the alkaline cations, which do not occupy the crown ether cavity of consecutive repeating units due to electrostatic repulsions. Furthermore, the relative entropy for the "free state → bound state" has been estimated using a procedure based on the covariance matrix atom-positional fluctuations. Evaluation of the entropic contributions allow us to complete the thermodynamics scenario of binding process, which was recently initiated by calculating the enthalpies at quantum mechanical level [Chem. Eur. J. 2009, 15, 4676]. Results indicate an entropycally driven binding preference.
■ INTRODUCTIONSelective host−guest interactions in combination with conducting polymers are exploited in iono-electronic devices, in which the complexation ↔ decomplexation processes allow an externally induced switching between two different states. 1−3 This phenomenon produces a detectable response, which is based on the transduction of chemical information (i.e., the formation of specific interactions) into the change of an electrical signal (i.e. the change of the electronic properties of the conjugated backbone). Crown ether-functionalized materials are particularly interesting for these applications due to their strong ion-dipole interactions with metal cations. In this respect different polythiophenes (PThs) with crown ether macrocycles directly fused to the heterocycles or linked to them through suitable spacers have been reported. Specifically, after Sone and co-workers prepared in 1989 the first crown ether functionalized thiophenes, 4 several modifications to improve their sensory performance were developed without success.5−7 However, crown ethers functionalized PThs displaying a satisfactory sensory response toward alkaline cations were reported by the groups of Baüerle, 8−12 Swager, 13−15 and Roncali. 16−19 In spite of the interesting properties of crown ether functionalized PThs, the microscopic information about both the sensing mechanism and the response of the polymer chains toward the presence of alkaline cations in the cavities of the macrocycles is very scarce. Within this context, we recently investigated the strength of the binding between alkaline ions (Li + , Na + , and K + ) and a functionalized PTh bearing a 15-crown-5-ether macrocycle (PTn-15c5e; Scheme 1), 20 which was found to be particularly successful in ion sensing. 9,10 For this purpose, quantum mechanical (QM) calculations and molecular dynamics (MD) simulations in dichloromethane were performed using model complexes involving one repe...