2019
DOI: 10.4236/health.2019.112012
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Impact of Nicotine Consumption on Hyper Acidic Patients Taking PPI: An <i>In-Vitro</i> and Computational Analysis

Abstract: The study aims to investigate the protein binding kinetics of nicotine and a PPI (pantoprazole) with Bovine Serum Albumin (BSA) through UV spectroscopy and computational modeling. Data was obtained by using nicotine and pantoprazole and warfarin and diazepam as the two site specific probes on Bovine serum albumin (BSA). In-vitro and in-silico modeling was carried out in creating an environment that simulates the body environment. Cellulose membrane tubes were cut into 9 cm and tied tightly not to let any mixtu… Show more

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Cited by 4 publications
(2 citation statements)
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References 26 publications
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“…AutoDock Vina 46 was used to determine the protein–ligand binding regions and identify the amino acid interactions, which served as the target protein for the ligands ( 1 – 16 ) during molecular docking. A grid box was selected to cover the entire protein, and the docking experiment was conducted with stable proteins and ligands.…”
Section: Methods and Computational Studiesmentioning
confidence: 99%
“…AutoDock Vina 46 was used to determine the protein–ligand binding regions and identify the amino acid interactions, which served as the target protein for the ligands ( 1 – 16 ) during molecular docking. A grid box was selected to cover the entire protein, and the docking experiment was conducted with stable proteins and ligands.…”
Section: Methods and Computational Studiesmentioning
confidence: 99%
“…Pymol version 2.5 [61] was used to generate three‐dimensional structures for molecular docking images. BIOVIA Discovery Studio [62] visualizer was used to visualize the binding modes of the protein‐ligand interaction, identify the 2D protein interactions between the ligand and protein, and determine the hydrogen density around the residues interacting with the protein.…”
Section: Computational Studiesmentioning
confidence: 99%