Question of the study Recent studies suggest that an acquired orexin deficiency plays a crucial role in the pathophysiology of human narcolepsy. Because the disease is strongly associated with the HLA-DR2 or DQB1*0602 antigen in the Caucasian population it has been hypothesized that autoimmune processes may target and destroy orexin-producing neurons. Patients and methods To identify signs of chronic inflammation or previous CNS infection, we investigated serum and cerebrospinal fluid (CSF) from a group of 22 narcoleptic patients and a control group of 22 patients suffering from major depression and looked for the occurrence of oligoclonal bands and significantly elevated specific antibody indices for important neurotropic viruses and Toxoplasma. Results Oligoclonal bands were present in 4 out of 22 narcoleptic patients compared to 1 out of 22 patients from the control group. In three of these four narcoleptic patients, specific antibody indices were present against herpes simplex or cytomegalovirus, respectively. Although the incidence of pathological CSF findings was higher in narcoleptic patients compared to the control group, statistical analysis did not reveal a significant difference between the two groups. Conclusions On the basis of the present results, no convincing evidence of chronic inflammation or previous infection supporting an autoimmune pathophysiology for narcolepsy could be identified.