Ideonella azotifigens sp. nov., an aerobic diazotroph of the Betaproteobacteria isolated from grass rhizosphere soil, and emended description of the genus Ideonella

Noar, Jesse D.; Buckley, Daniel H.

doi:10.1099/ijs.0.003368-0

Cited by 34 publications

(27 citation statements)

References 23 publications

(17 reference statements)

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“…The DNA G+C content of strain T , as determined by HPLC according to Mesbah et al (1989), was 67.9¡1.0 mol%, a value within the range reported for strains of species of the genus Ideonella (Malmqvist et al, 1994;Noar & Buckley, 2009). …”

Section: Aquincola Tertiaricarbonis L10 T (Dq656489)mentioning

confidence: 67%

“…in the second. Ethanolic molybdophosphoric acid (10 %, v/v) was used (Malmqvist et al, 1994) and I. azotifigens DSM 21438 T (Noar & Buckley, 2009). +, Positive reaction; 2, negative reaction; W, weakly positive reaction.…”

Section: Aquincola Tertiaricarbonis L10 T (Dq656489)mentioning

confidence: 99%

“…The genus Ideonella, first proposed by Malmqvist et al (1994) and significantly emended by Noar & Buckley (2009), belongs to the Rubrivivax-Roseateles-LeptothrixAzohydromonas-Aquincola-Ideonella branch of the order Burkholderiales in the class Betaproteobacteria (Garrity et al, 2005). At the time of writing the genus Ideonella comprises only two species with validly published names: Ideonella dechloratans, isolated from activated sludge (Malmqvist et al, 1994) and Ideonella azotifigens, isolated from grass rhizosphere soil (Noar & Buckley, 2009).…”

mentioning

confidence: 99%

“…At the time of writing the genus Ideonella comprises only two species with validly published names: Ideonella dechloratans, isolated from activated sludge (Malmqvist et al, 1994) and Ideonella azotifigens, isolated from grass rhizosphere soil (Noar & Buckley, 2009). Cells are Gram-stain-negative, mesophilic, aerobic, chemoorganotrophic, rod-shaped, motile by means of two or more polar or subpolar flagella.…”

mentioning

confidence: 99%

“…Cells are Gram-stain-negative, mesophilic, aerobic, chemoorganotrophic, rod-shaped, motile by means of two or more polar or subpolar flagella. Chemotaxonomically, cells possess summed feature 3 (comprising C 16 : 1 v7c and/or C 16 : 1 v6c) and C 16 : 0 as the predominant fatty acids, C 10 : 0 3-OH, C 12 : 0 2-OH and C 12 : 0 3-OH as the cellular hydroxy fatty acids, and DNA G+C contents of between 67.4 and 68 mol% (Malmqvist et al, 1994;Noar & Buckley, 2009). The present study was carried out to clarify the taxonomic position of a novel species of the genus Ideonella using a polyphasic taxonomic approach.…”

mentioning

confidence: 99%

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Ideonella paludis sp. nov., isolated from a marsh

Sheu

Chen

Young

et al. 2016

International Journal of Systematic and Evolutionary Microbiology

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A bacterial strain, designated KBP-31 T , was isolated from a water sample taken from the Banping Lake Wetland Park in Taiwan and characterized using a polyphasic taxonomic approach. Cells of strain KBP-31T were Gram-stain-negative, strictly aerobic, motile, light-yellow rods. Growth occurred at 10-37 8C (optimum 25 8C), at pH 6-8 (optimum pH 6) and with 0-1 % NaCl (w/v, optimum 0 %). Phylogenetic analyses based on 16S rRNA gene sequences showed that strain KBP-31 T belonged to the genus Ideonella and was most closely

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Section: Aquincola Tertiaricarbonis L10 T (Dq656489)mentioning

confidence: 67%

Section: Aquincola Tertiaricarbonis L10 T (Dq656489)mentioning

confidence: 99%

mentioning

confidence: 99%

mentioning

confidence: 99%

mentioning

confidence: 99%

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Ideonella paludis sp. nov., isolated from a marsh

Sheu

Chen

Young

et al. 2016

International Journal of Systematic and Evolutionary Microbiology

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Distinct Intra-lake Heterogeneity of Diazotrophs in a Deep Oligotrophic Mountain Lake

Wang

Xing

et al. 2019

Microb Ecol

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Cell growth and P(3HB) accumulation from CO2 of a carbon monoxide-tolerant hydrogen-oxidizing bacterium, Ideonella sp. O-1

Tanaka

Miyawaki

Yamaguchi

et al. 2011

Appl Microbiol Biotechnol

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Cell growth and accumulation of polyhydroxybutyric acid, P(3HB), from CO(2) in autotrophic condition of a newly isolated hydrogen-oxidizing bacterium, the strain O-1, was investigated. The bacterium, which was deposited in the Japan Collection of Microorganisms as JCM17105, autotrophically grows by assimilating H(2), O(2), and CO(2) as substrate. 16S rRNA gene sequence of the bacterium was the closest to Ideonella dechloratans (99%). Specific growth rate of the strain O-1 was faster than a hydrogen-oxidizing bacterium, Ralstonia eutropha, which is well-known P(3HB)-producing microorganism. The strain O-1 is tolerant to high O(2) concentration and it can grow above 30% (v/v) O(2), while the growth of R. eutropha and Alcaligenes latus was seriously inhibited. In culture medium containing 1 g/L (NH(4))(2)SO(4), cell concentration of the strain O-1 and P(3HB) increased to 6.75 and 5.26 g/L, respectively. The content of P(3HB) in the cells was 77.9% (w/w). The strain O-1 was very tolerant to carbon monoxide (CO) and it grew even at 70% (v/v) CO, while the growth of R. eutropha and A. latus were seriously inhibited at 5% (v/v) CO. From these results, it is expected that the strain O-1 will be useful in the manufacture of P(3HB) because the industrial exhaust gas containing CO(2), H(2), and CO can be directly used as the substrate in the fermentation process.

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Ideonella azotifigens sp. nov., an aerobic diazotroph of the Betaproteobacteria isolated from grass rhizosphere soil, and emended description of the genus Ideonella

Cited by 34 publications

References 23 publications

Ideonella paludis sp. nov., isolated from a marsh

Ideonella paludis sp. nov., isolated from a marsh

Distinct Intra-lake Heterogeneity of Diazotrophs in a Deep Oligotrophic Mountain Lake

Cell growth and P(3HB) accumulation from CO2 of a carbon monoxide-tolerant hydrogen-oxidizing bacterium, Ideonella sp. O-1

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