2011
DOI: 10.1128/ec.05182-11
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Identification of Tissue Cyst Wall Components by Transcriptome Analysis of In Vivo and In Vitro Toxoplasma gondii Bradyzoites

Abstract: The Toxoplasma gondii bradyzoite is essential to establish persistent infection, yet little is known about what factors this developmental form secretes to establish the cyst or interact with its host cell. To identify candidate bradyzoite-secreted effectors, the transcriptomes of in vitro tachyzoites 2 days postinfection, in vitro bradyzoites 4 days postinfection, and in vivo bradyzoites 21 days postinfection were interrogated by microarray, and the program SignalP was used to identify signal peptides indicat… Show more

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Cited by 101 publications
(136 citation statements)
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“…Interestingly, the GRA25 transcript is expressed in at least three life cycle stages of the parasite: sporozoites, tachyzoites, and bradyzoites (35,(43)(44)(45), and the protein has likewise been readily detected in the tachyzoite and sporozoite stages (44). We have not investigated the function of GRA25 in the bradyzoite or sporozoite stages, but we did observe that GRA25-deficient parasites are able to form cysts in the brains of chronically infected mice (data not shown).…”
Section: Discussionmentioning
confidence: 86%
“…Interestingly, the GRA25 transcript is expressed in at least three life cycle stages of the parasite: sporozoites, tachyzoites, and bradyzoites (35,(43)(44)(45), and the protein has likewise been readily detected in the tachyzoite and sporozoite stages (44). We have not investigated the function of GRA25 in the bradyzoite or sporozoite stages, but we did observe that GRA25-deficient parasites are able to form cysts in the brains of chronically infected mice (data not shown).…”
Section: Discussionmentioning
confidence: 86%
“…Using cluster analysis of transcripts of higher abundance in H. hammondi than in T. gondii VEG sporozoites along with the T. gondii M4 expression data set (39,40), we identified two gene clusters of interest: (i) genes that were more highly expressed in H. hammondi than in T. gondii VEG oocysts that were poorly expressed in all of the life cycle stages in the T. gondii M4 data set ("Hh specific") and (ii) genes that were more highly expressed in H. hammondi than in T. gondii VEG oocysts that were up-regulated during the tachyzoite-to-bradyzoite transition in the T. gondii M4 data set ("Hh-TgCyst-high"). To identify transcripts with these profiles in an unbiased way, the entire data set was analyzed using Pavlidis template matching (PTM) (47) implemented in TM4 using a P value threshold of 1 ϫ 10 Ϫ5 and setting either the "high" values to the maximum of 1 and the "low" values to a minimum of 0.…”
Section: Methodsmentioning
confidence: 99%
“…A custom script (written in Perl and available upon request) was written to generate the CDF file. Raw CEL files for the H. hammondi and T. gondii VEG oocyst hybridizations, as well as those for the complete life cycle hybridizations for T. gondii strain M4 (GEO accession number GSE32427 [39,40]) were analyzed using the Affy package implemented in R statistical software (41), and all data were normalized ("constant" method) and log 2 transformed using "median polishing" (42). To identify genes with significantly different abundances between species, we used Rank Products (43) with a false-discovery rate of 1/100 as implemented in the MeViewer Module of the TM4 microarray software suite (44).…”
Section: Methodsmentioning
confidence: 99%
“…Similarly, T. gondii strains containing deletions in the nucleotide-sugar transporter (TgNST1) can no longer interact with lectins and display severe defects in persistence during chronic infection (143). Analysis of the bradyzoite transcriptome for potentially secreted proteins identified two proteins, bradyzoite pseudokinase 1 and microneme adhesive repeat domain-containing protein 4, which colocalize with DBA on the cyst wall (144)(145)(146). Glycomic and proteomic analyses of the cyst wall and the parasites within it would greatly enhance the understanding of bradyzoite biology.…”
Section: Molecular Analysis Of Bradyzoitesmentioning
confidence: 99%
“…Microarray technology has been an excellent tool for characterizing transcriptomic differences between tachyzoites and bradyzoites in tissue culture (144)(145)(146). Studies of the transcriptome have also compared in vitro and in vivo samples with in vitro tachyzoites, in vivo bradyzoites, and feline-derived oocysts, as well as tissue culture tachyzoites and bradyzoites, developing oocysts, and bradyzoites purified from mouse brains 21 days postinfection (144,147). To gain more insight on in vivo development of T. gondii, host microarrays were performed on peritoneum-derived tachyzoites from different strain types of T. gondii from wild-type and IFN-␥-deleted mice (148)(149)(150).…”
Section: Molecular Analysis Of Bradyzoitesmentioning
confidence: 99%