2016
DOI: 10.1007/s12539-016-0178-3
|View full text |Cite
|
Sign up to set email alerts
|

Identification of Novel Abiotic Stress Proteins in Triticum aestivum Through Functional Annotation of Hypothetical Proteins

Abstract: Cereal grain bread wheat (T. aestivum) is an important source of food and belongs to Poaceae family. Hypothetical proteins (HPs), i.e., proteins with unknown functions, share a substantial portion of wheat proteomes and play important roles in growth and physiology of plant system. Several functional annotations studies utilizing the protein sequences for characterization of role of individual protein in physiology of plant systems were being reported in recent past. In this study, an integrated pipeline of so… Show more

Help me understand this report

Search citation statements

Order By: Relevance

Paper Sections

Select...
2
1
1
1

Citation Types

0
12
0

Year Published

2017
2017
2020
2020

Publication Types

Select...
6
1

Relationship

3
4

Authors

Journals

citations
Cited by 22 publications
(13 citation statements)
references
References 58 publications
0
12
0
Order By: Relevance
“…Functional analysis of uncharacterized proteins was performed on the basis of similarity search against protein database, i.e., PDB, NCBI, and UniProt as well as conserved domain-based protein family annotations (Gupta et al, 2016b). Thus, we have annotated and identified the functions for 106 uncharacterized proteins expressed during different ND.…”
Section: Resultsmentioning
confidence: 99%
See 3 more Smart Citations
“…Functional analysis of uncharacterized proteins was performed on the basis of similarity search against protein database, i.e., PDB, NCBI, and UniProt as well as conserved domain-based protein family annotations (Gupta et al, 2016b). Thus, we have annotated and identified the functions for 106 uncharacterized proteins expressed during different ND.…”
Section: Resultsmentioning
confidence: 99%
“…Further functional role of different NRGs encoding uncharacterized proteins/enzymes (Table 2) were identified and explained. Thereafter, the functional roles of 35 transcripts out of 55 transcripts were annotated through standard protocols (Gupta et al, 2016b). Remaining 20 transcripts are yet to be functionally characterized in wheat varieties, through in-vitro validation studies.…”
Section: Discussionmentioning
confidence: 99%
See 2 more Smart Citations
“…Out of these 177 protein sequences, 43 had DO term while 13 (out of these 43 sequences) were having homology with human proteome. Remaining 30 hypothetical uncharacterized protein sequences were observed which had DO term but were not homologous with human proteome 26,27 . Thus, the 30 uncharacterized proteins may be used as putative drug target for M. leprae.…”
Section: Methodsmentioning
confidence: 99%