Identification of miRNA from Bouteloua gracilis, a drought tolerant grass, by deep sequencing and their in silico analysis

Ordóñez-Baquera, Perla Lucía; González-Rodríguez, Everardo; Aguado-Santacruz, Gerardo Armando; Rascón-Cruz, Quintín; Conesa, Ana; Moreno-Brito, Verónica; Echavarría, Raquel; Domínguez-Viveros, Joel

doi:10.1016/j.compbiolchem.2016.11.001

Cited by 4 publications

(1 citation statement)

References 53 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…The transcriptional patterns of diverse miRNA families have been detected in distinct agricultural plant species in the context of nitrogen. Examples includes soyabean, Arabidopsis thaliana, Bouteloua gracilis [32][33][34][35][36][37][38][39][40]. A comprehensive summary of various miRNAs participating in the response to nitrogen limitation and their target is listed in Table 1.…”

Section: Mirnas In Nitrogen (N) Homeostasismentioning

confidence: 99%

Whispers of Nourishment: Unveiling the Role of Non-Coding RNA in Plant Nutrient Availability

Keshari Nayak,

Chauhan,

Kumar

et al. 2024

Genetics

View full text Add to dashboard Cite

Micronutrients play a vital role in crop growth and development, as they are essential for various physiological processes and biochemical reactions within plants. Insufficient levels of micronutrients in the soil can lead to nutrient deficiencies in plants, resulting in stunted growth, reduced yields, and poor overall health. In the last decades, it has been seen that noncoding RNAs (ncRNAs) are involved in the regulation of micronutrient uptake, transport, and utilization in plants. They can modulate the expression of genes encoding transporters, chelators, and enzymes related to micronutrient acquisition and utilization. By fine-tuning gene expression, ncRNAs can help plants adapt to varying nutrient availability and optimize their nutrient uptake efficiency. Understanding the interplay between micronutrients and ncRNAs provides insights into the intricate molecular mechanisms underlying nutrient homeostasis and plant adaptation to nutrient stress. This study delves into the origin of various noncoding RNAs, such as miRNA, siRNA, and tsRNA, elucidating their pivotal role in maintaining micro- and macronutrient equilibrium within plant tissues. Overall, this research underscores the intricate interplay between micronutrients and noncoding RNAs in crop plants, shedding light on the intricacies of nutrient regulation and opening up new avenues for future investigation and potential applications in agriculture.

show abstract

Section: Mirnas In Nitrogen (N) Homeostasismentioning

confidence: 99%

Whispers of Nourishment: Unveiling the Role of Non-Coding RNA in Plant Nutrient Availability

Keshari Nayak,

Chauhan,

Kumar

et al. 2024

Genetics

View full text Add to dashboard Cite

show abstract

Analysis of microRNA expression profile in specific pathogen-free chickens in response to reticuloendotheliosis virus infection

Gao

Liu

et al. 2016

Appl Microbiol Biotechnol

View full text Add to dashboard Cite

Reticuloendotheliosis virus (REV) is an avian retrovirus that causes immunosuppression, growth retardation, and oncogenesis in a variety of birds. REV infection is epidemic in many countries. In this study, we used high-throughput sequencing to identify microRNAs (miRNAs) associated with REV infection. A total of 88 differentially expressed miRNAs were identified in samples collected on days 21 and 28 post-REV infection. Possible target genes of the differentially expressed miRNAs were analyzed. We observed that expression of proapoptotic, proto-oncogene, and carcinogenic cytokine mRNAs was highly upregulated, whereas expression of antiapoptotic cytokine mRNAs was significantly downregulated. Our findings provide a potential link between miRNA expression and the pathogenesis of REV infection.

show abstract

Recent efforts in developing high-yield, drought-tolerant rice varieties

Sandhu

Yadav

Kumar

2020

Advancement in Crop Improvement Techniques

View full text Add to dashboard Cite

Identification of miRNA from Bouteloua gracilis, a drought tolerant grass, by deep sequencing and their in silico analysis

Cited by 4 publications

References 53 publications

Whispers of Nourishment: Unveiling the Role of Non-Coding RNA in Plant Nutrient Availability

Whispers of Nourishment: Unveiling the Role of Non-Coding RNA in Plant Nutrient Availability

Analysis of microRNA expression profile in specific pathogen-free chickens in response to reticuloendotheliosis virus infection

Recent efforts in developing high-yield, drought-tolerant rice varieties

Contact Info

Product

Resources

About