A lipooligosaccharide (LOS) mutant of Neisseria meningitidis serogroup B strain NMB (immunotype L3,7,9) was identified in a Tn916 (tetM) mutant bank by loss of reactivity with monoclonal antibody 3F11, which recognizes the terminal Gal134GlcNAc epitope in the lacto-N-neotetraose moiety of the wild-type LOS structure. The mutant, designated 559, was found to express a truncated LOS of 3.0 kDa. Southern and PCR analyses demonstrated that there was a single intact Tn916 insertion (class I) in the mutant 559 chromosome. Linkage of the LOS phenotype and the Tn916 insertion was confirmed by transformation of the wild-type parent. Nucleotide sequence analysis of the region surrounding the transposition site revealed a 1,065-bp open reading frame (ORF). A homology search of the GenBank/EMBL database revealed that the amino acid sequence of this ORF had 46.8% similarity and 21.2% identity with the ␣1,2 N-acetylglucosamine transferase (RfaK) from Salmonella typhimurium. Glycosyl composition and linkage analysis of the LOS produced by mutant 559 revealed that the lacto-N-neotetraose group which is attached to heptose I (HepI) and the N-acetylglucosamine and glucose residues that are attached to HepII in the inner core of the parental LOS were absent. These analyses also showed that the HepII residue in both the parent and the mutant LOS molecules was phosphorylated, presumably by a phosphoethanolamine substituent. The insertion of nonpolar and polar antibiotic resistance cartridges into the parental rfaK gene resulted in the expression of LOS with the same mobility as that produced by mutant 559. This result indicated that the inability to add the lacto-N-neotetraose group to the 559 LOS is not due to a polar effect on a gene(s) downstream of rfaK. Our data indicate that we have identified the meningococcal ␣1,2 N-acetylglucosamine transferase responsible for the addition of N-acetylglucosamine to HepII. We propose that the lack of ␣-chain extension from HepI in the LOS of mutant 559 may be due to structural constraints imposed by the incomplete biosynthesis of the LOS inner core.Lipooligosaccharide (LOS) is a major virulence factor of the obligate human pathogen Neisseria meningitidis (54, 55). Levels of LOS correlate with the release of inflammatory cytokines (interleukin 1, interleukin 6, and tumor necrosis factor alpha) important in the pathogenesis of meningococcemia and meningococcal meningitis (2). Direct cytotoxic effects of meningococcal LOS have also been observed in endothelial cell tissue models infected with N. meningitidis (7). The LOS structures of N. meningitidis have been well characterized both immunologically (53) and biochemically (9,17,23,31,35,57). Meningococcal LOS consists of a lipid A to which a conserved inner core of two heptoses and two 2-keto-3-deoxyoctulosonic acid (KDO) residues is attached. The sugar composition of the ␣-chain oligosaccharide attached to heptose I (HepI) of the inner core is variable (55) but in certain immunotypes is a perfect mimic of the sugars attached to the human sphi...