Identification and expression analysis of candidate genes associated with stem gall disease in Coriander (Coriandrum sativum L.) cultivars

Choudhary, Sharda; Naika, Mahantesha Bn; Meena, R. D.

doi:10.1007/s11033-020-05630-0

Cited by 3 publications

(1 citation statement)

References 39 publications

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“…As for the biotic stresses, we mention the efforts made in Coriandrum sativum for the identification of genes able to confer resistance to stem gall disease [ 134 , 135 ] such as USP ( UNIVERSAL STRESS PROTEIN ), ANK ( ANKYRIN REPEAT-CONTAINING PROTEIN ), PDR ( PROBABLE DISEASE RESISTANCE ) and HSP20 ( HEAT SHOCK PROTEIN 20 ). A single recessive resistance gene ( cmv ) against Celery Mosaic Virus (CeMV), the most common viral disease of celery, was identified by D’Antonio et al [ 136 ], and two markers ( me1em2 and me8em2 ) were found to be tightly associated with this locus [ 137 ].…”

Section: Genomic and Transcriptomic Resources For Breeding Varieties And Phylogenetic Analysesmentioning

confidence: 99%

Impact of Genomic and Transcriptomic Resources on Apiaceae Crop Breeding Strategies

Palumbo

Vannozzi

Barcaccia

2021

IJMS

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The Apiaceae taxon is one of the most important families of flowering plants and includes thousands of species used for food, flavoring, fragrance, medical and industrial purposes. This study had the specific intent of reviewing the main genomics and transcriptomic data available for this family and their use for the constitution of new varieties. This was achieved starting from the description of the main reproductive systems and barriers, with particular reference to cytoplasmic (CMS) and nuclear (NMS) male sterility. We found that CMS and NMS systems have been discovered and successfully exploited for the development of varieties only in Foeniculum vulgare, Daucus carota, Apium graveolens and Pastinaca sativa; whereas, strategies to limit self-pollination have been poorly considered. Since the constitution of new varieties benefits from the synergistic use of marker-assisted breeding in combination with conventional breeding schemes, we also analyzed and discussed the available SNP and SSR marker datasets (20 species) and genomes (8 species). Furthermore, the RNA-seq studies aimed at elucidating key pathways in stress tolerance or biosynthesis of the metabolites of interest were limited and proportional to the economic weight of each species. Finally, by aligning 53 plastid genomes from as many species as possible, we demonstrated the precision offered by the super barcoding approach to reconstruct the phylogenetic relationships of Apiaceae species. Overall, despite the impressive size of this family, we documented an evident lack of molecular data, especially because genomic and transcriptomic resources are circumscribed to a small number of species. We believe that our contribution can help future studies aimed at developing molecular tools for boosting breeding programs in crop plants of the Apiaceae family.

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