This article is available online at http://www.jlr.org the biohydrogenation of ␣ -linolenic acid ( cis -9 cis -12 cis -15 C18:3) in ruminants involves an initial isomerization to a conjugated triene ( cis -9 trans -11 cis -15 C18:3) named rumelenic acid (RLnA) followed by hydrogenation of double bonds at carbons 9, 15, and 11 to yield trans -11 cis -15 C18:2, trans -11 C18:1 (vaccenic acid), and C18:0 ( 1 ). Structural characterization of RLnA was recently confi rmed by GC-MS after synthesis of both its picolinyl ester and dimethyloxazoline (DMOX) derivative ( 2 ), and different studies confi rmed that minute amounts of ␣ -linolenic acid biohydrogenation intermediates are present in milk fat ( 3, 4 ). However, molecular structure of other minor intermediates also produced from dietary PUFA biohydrogenation and after transferred to milk fat still remains unclear.Although analysis of picolinyl esters or DMOX derivatives by electron impact GC-MS have demonstrated to be useful for identifying double bond positions in PUFA, this approach does not supply a reliable assignment of geometrical confi guration. In contrast, covalent adduct chemical ionization tandem mass spectrometry (CACI-MS/MS) serves as a powerful tool for identifying positional and geometric isomers of conjugated linoleic acid (CLA) methyl esters ( 5 ) and should prove quite useful for the analysis of conjugated diene methyl esters with longer chain length as well ( 6, 7 ). CACI-MS/MS concentrates signal in a very few diagnostic ions, which can then be plotted as indicators for the parent compound. Furthermore, this technique allowed the direct analysis of fatty acid methyl esters Abbreviations: Ag + -HPLC, silver ion high performance liquid chromatography; CLA, conjugated linoleic acid; CACI-MS, covalent adduct chemical ionization mass spectrometry; CACI-MS/MS, covalent adduct chemical ionization tandem mass spectrometry; DMOX dimethyloxazoline; FAME, fatty acid methyl esters; FID, fl ame ionization detector; RA, rumenic acid, cis -9 trans -11 C18:2; RLnA, rumelenic acid, cis -9 trans -11 cis -15 C18:3; TMR, total mixed ration; t R , retention time.