Topaz1, an essential gene for murine spermatogenesis, down-regulates the expression of numerous testis-specific long non-coding RNAs

Abstract

Spermatogenesis comprises a coordinated process, including meiosis, to produce fertile male gametes. Previous study reported that Topaz1 is a germ cell specific gene highly conserved in vertebrates. Topaz1 knockout male mice are sterile. The mutant testes lack haploid germ cells and meiosis arrests at the first-division prophase-metaphase transition. Here, in order to better characterize the testicular phenotype of Topaz1-/- mice, we used RNA-seq analyses at two different developmental stages. At postnatal days 16 (P16), 205 genes were differentially expressed genes (DEGs) in Topaz1-/- testes. They suggest stress conditions in mutant testes. At P18, the number of DEGs was increased 10-fold and 90% were down-regulated. The absence of Topaz1 seems to disturb the expression of genes involved in microtubule and/or cilium mobility, spermatogenesis and first meiotic division during the transition from prophase to metaphase. This is consistent with the Topaz1?/- testis phenotype where microtubule networks and centrosomes are disrupted. Moreover, a quarter of P18-DEGs are long non-coding RNAs (lncRNAs). Three of them, down-regulated at P16 and P18, were studied. They are testis-specific, located in spermatocytes and their expression starts between P11 and P15. We report here the effects of the suppression of one of these lncRNAs, 4939463O16Rik. The mouse fertility is not affected although the sperm parameters are disturbed. Transcriptome of P18-4939463O16Rik-/- testes is altered and the affected molecular pathways include microtubule-based process, regulation of cilium movement, spermatogenesis, male gamete differentiation. The absence of TOPAZ1 protein or of 4930463O16Rik lncRNA showed the same enrichment clusters in mutant testes despite a contrasted phenotype on the male fertility. In conclusion, Topaz1 is an essential gene for male fertility in mice and seems to stabilize the expression of many lncRNAs. Its absence leads to meiotic arrest. Suppression of one lncRNA is dispensable for mouse fertility but is necessary during terminal differentiation of male gametes.