Abstract:Recently introduced, linked-read technologies, such as the 10X chromium system, use microfluidics to tag multiple short reads from the same long fragment (50-200 kbp) with a small sequence, called a barcode. They are inexpensive and easy to prepare, combining the accuracy of short-read sequencing with the long-range information of barcodes. The same barcode can be used for several different fragments, which complicates the analyses. We present QuickDeconvolution (QD), a new software for deconvolving a set of r… Show more
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