We
have recently identified a new class of filamenting temperature-sensitive
mutant Z (FtsZ)-interacting compounds that possess a 2,4,6-trisubstituted
pyrimidine–quinuclidine scaffold with moderate antibacterial
activity. Employing this scaffold as a molecular template, a compound
library of amine-linked 2,4,6-trisubstituted pyrimidines with 99 candidates
was successfully established by employing an efficient convergent
synthesis designed to explore their structure–activity relationship.
The results of minimum inhibitory concentration (MIC) assay against Staphylococcus aureus strains and cytotoxicity assay
against the mouse L929 cell line identified those compounds with potent
antistaphylococcal properties (MIC ranges from 3 to 8 μg/mL)
and some extent of cytotoxicity against normal cells (IC50 ranges from 6 to 27 μM). Importantly, three compounds also
exhibited potent antibacterial activities against nine clinically
isolated methicillin-resistant S. aureus (MRSA) strains. One of the compounds, 14av_amine16,
exhibited low spontaneous frequency of resistance, low toxicity against Galleria mellonella larvae, and the ability to rescue G. mellonella larvae (20% survival rate at a dosage
of 100 mg/kg) infected with a lethal dose of MRSA ATCC 43300 strain.
Biological characterization of compound 14av_amine16 by
saturation transfer difference NMR, light scattering assay, and guanosine
triphosphatase hydrolysis assay with purified S. aureus FtsZ protein verified that it interacted with the FtsZ protein.
Such a property of FtsZ inhibitors was further confirmed by observing
iconic filamentous cell phenotype and mislocalization of the Z-ring
formation of Bacillus subtilis. Taken
together, these 2,4,6-trisubstituted pyrimidine derivatives represent
a novel scaffold of S. aureus FtsZ
inhibitors.