A complex consisting of evolutionarily conserved FD, FLOWERING LOCUS T (FT) proteins is a regulator of floral transition. Intriguingly, FT orthologs are also implicated in developmental transitions distinct from flowering, such as photoperiodic control of bulbing in onions, potato tuberization, and growth cessation in trees. However, whether an FT-FD complex participates in these transitions and, if so, its mode of action, are unknown. We identified two closely related FD homologs, FD-like 1 (FDL1) and FD-like 2 (FDL2), in the model tree hybrid aspen. Using gain of function and RNAisuppressed FDL1 and FDL2 transgenic plants, we show that FDL1 and FDL2 have distinct functions and a complex consisting of FT and FDL1 mediates in photoperiodic control of seasonal growth. The downstream target of the FT-FD complex in photoperiodic control of growth is Like AP1 (LAP1), a tree ortholog of the floral meristem identity gene APETALA1. Intriguingly, FDL1 also participates in the transcriptional control of adaptive response and bud maturation pathways, independent of its interaction with FT, presumably via interaction with ABSCISIC ACID INSENSITIVE 3 (ABI3) transcription factor, a component of abscisic acid (ABA) signaling. Our data reveal that in contrast to its primary role in flowering, FD has dual roles in the photoperiodic control of seasonal growth and stress tolerance in trees. Thus, the functions of FT and FD have diversified during evolution, and FD homologs have acquired roles that are independent of their interaction with FT. 5), is critical for the formation of protein complexes to control flowering via transcriptional control of downstream targets [e.g., floral meristem identity genes, transcription factors APETALA1 (AP1) and OsMADS1]. Whereas the FT-FD complex promotes flowering at the shoot apical meristem (4), BRC1 appears to delay floral transition at the axillary meristem (5). These findings indicate that depending upon its interaction partner, FT-containing complexes can have distinct roles. The structure of FT-FD complex elucidated in rice has shown that a 14-3-3 protein mediates the interaction between rice FT homolog HEADING DATE 3a (Hd3a) and FD homolog OsFD1 via the C-terminally located SAP (serine alanine proline) motif in OsFD1 to generate the active nuclear localized florigen activation complex (3).Interestingly, FT homologs are also involved in the control of diverse developmental transitions distinct from flowering, such as tuberization in potatoes (6), bulb formation in onions (7), stomatal opening (8), and photoperiodic control of seasonal growth in trees (9-11). These observations suggest that complexes of FT are not only important to the control of flowering but have a broader functionality. However, the mechanisms underlying the functional diversity of the FT complexes and how they can participate in the control of developmental pathways distinct from flowering are not well understood because, in contrast to FT, FD or BRC1 (or other interactors of FT), which provide DNA binding ability to ...