Handbook of Dietary and Nutritional Aspects of Human Breast Milk 2013
DOI: 10.3920/978-90-8686-764-6_14
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Human milk proteins: strides in proteomics and benefits in nutrition research

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“…To evaluate the level of isolation capability reached by each fractionation approach tested, proteins from untreated human milk, whey, and CN extracts were subjected to digestion and analysis by LC–MS/MS (see sections , , and ). A total of 123 proteins (see Supporting Information) were identified in the human milk sample, all of them previously reported. ,, Venn diagrams, jointly with normalized areas of the relevant proteins present in whey and CN fractions, were used as an indicator of cross-contamination degree. From Venn diagrams (Figure ), it can be derived that only 35 proteins are recognized in all three extracts of CaP precipitation, whereas 40 and 44 proteins are found for CaP (2×) and isoelectric precipitation protocols, respectively.…”
Section: Results and Discussionmentioning
confidence: 99%
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“…To evaluate the level of isolation capability reached by each fractionation approach tested, proteins from untreated human milk, whey, and CN extracts were subjected to digestion and analysis by LC–MS/MS (see sections , , and ). A total of 123 proteins (see Supporting Information) were identified in the human milk sample, all of them previously reported. ,, Venn diagrams, jointly with normalized areas of the relevant proteins present in whey and CN fractions, were used as an indicator of cross-contamination degree. From Venn diagrams (Figure ), it can be derived that only 35 proteins are recognized in all three extracts of CaP precipitation, whereas 40 and 44 proteins are found for CaP (2×) and isoelectric precipitation protocols, respectively.…”
Section: Results and Discussionmentioning
confidence: 99%
“…Only peptide and protein identifications with ≥95% confidence (unused score ≥ 1.3) were validated. Protein identifications were accepted either if they contained at least two identified peptides or if they contained only one peptide but they have been previously reported in any of the following references: refs , , and . The proteomics data and result files from the analysis have been deposited to the ProteomeXchange Consortium via the PRIDE partner repository, with the data set identifier PXD010315 and 10.6019/PXD010315.…”
Section: Materials and Methodsmentioning
confidence: 99%