BACKGROUND
Few studies have focused on microbial diversity in indoor environments of ships, as well as the role of the microbiome and its ecological interconnections. In this study, we investigated the microbiome and virome present on the internal surfaces of a polar ship in different stages (beginning, during, and at the end) of the Brazilian Antarctic expedition in order to evaluate abundance of microorganisms in different periods.
OBJECTIVES AND METHODS
We used shotgun metagenomic analysis on pooled samples from sampling surfaces in the ship’s interior to track the microbial diversity.
FINDINGS
Considering the total fraction of the microbiome, the relative abundance of bacteria, eukaryotes, viruses, and archaea was 83.7%, 16.2%, 0.04%, and 0.002%, respectively.
Proteobacteria
was the most abundant bacterial phyla, followed by
Firmicutes
,
Actinobacteria
, and
Bacteroidetes
. Concerning the virome, the greatest richness of viral species was identified during the middle of the trip, including ten viral families after de novo assembly:
Autographiviridae
,
Chrysoviridae
,
Genomoviridae
,
Herelleviridae
,
Myoviridae
,
Partitiviridae
,
Podoviridae
,
Potyviridae
,
Siphoviridae
, and
Virgaviridae
.
MAIN CONCLUSIONS
This study contributed to the knowledge of microbial diversity in naval transportation facilities, and variations in the abundance of microorganisms probably occurred due to factors such as the number of passengers and activities on the ship.