2012
DOI: 10.1371/journal.pone.0034390
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Host Immune Transcriptional Profiles Reflect the Variability in Clinical Disease Manifestations in Patients with Staphylococcus aureus Infections

Abstract: Staphylococcus aureus infections are associated with diverse clinical manifestations leading to significant morbidity and mortality. To define the role of the host response in the clinical manifestations of the disease, we characterized whole blood transcriptional profiles of children hospitalized with community-acquired S. aureus infection and phenotyped the bacterial strains isolated. The overall transcriptional response to S. aureus infection was characterized by over-expression of innate immunity and hemat… Show more

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Cited by 96 publications
(114 citation statements)
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“…[51][52][53]) or 5 on Staphylococcus aureus infection (e.g. [54,55]). Notably considerable interest has also emerged recently over the use of blood transcriptomic platforms for the profiling of in vivo responses to vaccines (e.g.…”
Section: Blood Transcriptome Profiling Studies In Health and Diseasementioning
confidence: 99%
“…[51][52][53]) or 5 on Staphylococcus aureus infection (e.g. [54,55]). Notably considerable interest has also emerged recently over the use of blood transcriptomic platforms for the profiling of in vivo responses to vaccines (e.g.…”
Section: Blood Transcriptome Profiling Studies In Health and Diseasementioning
confidence: 99%
“…This approach deconvolutes complex transcriptional profiles into functionally interpretable patterns through the evaluation of combined expression responses of predefined disease, cell type, and stimulus-specific coexpressed gene groups. We used versions of the functional modules defined by Chaussabel et al (21,22) that were updated through meta-analysis of a much larger transcriptional dataset encompassing many more disease states (23), to annotate the differentially expressed gene lists and to examine the differential expression of the overall modules themselves. We confirmed the functional annotations of the gene modules themselves by performing canonical pathway enrichment analysis (Dataset S1, tab 3).…”
Section: Mrkad5/hiv Dramatically Remodels Peripheral Blood Mononucleamentioning
confidence: 99%
“…Using the K-means algorithm to cluster genes with similar expression patterns in multiple disease datasets, Chaussabel et al [48] identified 28 transcriptional PBMC modules that were applied to systemic lupus erythematosus. These gene sets were later expanded and used to study the human blood transcriptional changes induced by virus [49] and bacterial [50,51] infections as well as vaccination [12]. The 'immunologic signatures' collection of MSigDB [52] contains gene sets representing a broad range of cell states and perturbations within the immune system.…”
Section: Recent Tools and Developmentsmentioning
confidence: 99%