Massive infection of memory CD4 T cells is a hallmark of early simian immunodeficiency virus (SIV) infection, with viral infectionHere we show that, at day 10 p.i., Lin ؊ HLA-DR ؉ CD11c/123 ؊ CD13 ؉ CD14 ؊ macrophages in the jejunal mucosa were infected, albeit at lower levels than CD4 memory T cells. Interestingly, Lin ؊ HLA-DR ؉ CD11c/123 ؊ CD13 ؉ CD14 ؊ macrophages in peripheral blood, like their mucosal counterparts, were preferentially infected compared to Lin ؊ HLA-DR ؉ CD11c/123 ؊ CD13 ؉ CD14 ؉ monocytes, suggesting that differentiated macrophages were selectively infected by SIV. CD13 ؉ CD14 ؊ macrophages expressed low levels of CD4 compared to CD4 T cells but expressed similar levels of CCR5 as lymphocytes. Interestingly, CD13 ؉ CD14 ؊ macrophages expressed Apobec3G at lower levels than CD13 ؉ CD14 ؉ monocytes, suggesting that intracellular restriction may contribute to the differential infection of mononuclear subsets. Taken together, our results suggest that CD13 ؉ CD14 ؊ macrophages in mucosal and peripheral tissues are preferentially infected very early during the course of SIV infection.