Abstract:Throughout the history of mankind, microorganisms have been of enormous social and economic importance. Without even being aware of their existence, very early on in history man was using them in the production of food and beverages. The Sumerians and Babylonians were practising the brewing of beer before 6000 BC, references to wine making can be found in the Book of Genesis and the Egyptians used yeast for baking bread. However, knowledge of the production of chemicals such as alcohols and organic acids throu… Show more
“…The enzymes used in the blood sugar testing kits have a shelf lifetime of more than one year at ambient temperature. High fructose corn syrup, low-cost sucrose replacement, is made by stabilized glucose isomerase, which can work at ~60 °C for even about two years [62]. We estimated that the enzyme costs would be very small when every enzyme in the SyPaB cocktails has total turn-over number (TTN) values of more than 10 7 -10 8 [31,33,35].…”
Section: Sypab Challenges and Opportunitiesmentioning
confidence: 99%
“…We estimated that the enzyme costs would be very small when every enzyme in the SyPaB cocktails has total turn-over number (TTN) values of more than 10 7 -10 8 [31,33,35]. Based on our experience and data in the literature, it is relatively easy to obtain thermoenzymes meeting with such basic TTN requirement, for example, Clostridium themocellum phosphoglucomutase (PGM) [63], C. themocellum phosphoglucose isomerase (PGI) [64], Thermotoga martima 6-phosphogluconate dehydrogenase (6PGDH) [65], T. martima fructose bisphosphatase (FBP) [66], and immobilized glucose isomerase [62]. Costly enzymes purchased from Sigma-Aldrich and other biotechnology companies (e.g., New England Biolabs) give most researchers an impression that enzymes are very costly.…”
Section: Sypab Challenges and Opportunitiesmentioning
confidence: 99%
“…The aforementioned example of glucose isomerase stability is only possible due to its immobilization permitting it to function at 60 °C for more than two years before it must be replaced [62]. Low-cost enzyme immobilization technologies are becoming widely-adopted, for example, cross-linking enzyme aggregate (CLEA) [78][79][80] and cellulose-binding module-tagged (CBM-tagged) protein immobilization [74,[81][82][83][84].…”
Section: Sypab Challenges and Opportunitiesmentioning
Abstract:The hydrogen economy presents an appealing energy future but its implementation must solve numerous problems ranging from low-cost sustainable production, high-density storage, costly infrastructure, to eliminating safety concern. The use of renewable carbohydrate as a high-density hydrogen carrier and energy source for hydrogen production is possible due to emerging cell-free synthetic biology technology-cell-free synthetic pathway biotransformation (SyPaB
“…The enzymes used in the blood sugar testing kits have a shelf lifetime of more than one year at ambient temperature. High fructose corn syrup, low-cost sucrose replacement, is made by stabilized glucose isomerase, which can work at ~60 °C for even about two years [62]. We estimated that the enzyme costs would be very small when every enzyme in the SyPaB cocktails has total turn-over number (TTN) values of more than 10 7 -10 8 [31,33,35].…”
Section: Sypab Challenges and Opportunitiesmentioning
confidence: 99%
“…We estimated that the enzyme costs would be very small when every enzyme in the SyPaB cocktails has total turn-over number (TTN) values of more than 10 7 -10 8 [31,33,35]. Based on our experience and data in the literature, it is relatively easy to obtain thermoenzymes meeting with such basic TTN requirement, for example, Clostridium themocellum phosphoglucomutase (PGM) [63], C. themocellum phosphoglucose isomerase (PGI) [64], Thermotoga martima 6-phosphogluconate dehydrogenase (6PGDH) [65], T. martima fructose bisphosphatase (FBP) [66], and immobilized glucose isomerase [62]. Costly enzymes purchased from Sigma-Aldrich and other biotechnology companies (e.g., New England Biolabs) give most researchers an impression that enzymes are very costly.…”
Section: Sypab Challenges and Opportunitiesmentioning
confidence: 99%
“…The aforementioned example of glucose isomerase stability is only possible due to its immobilization permitting it to function at 60 °C for more than two years before it must be replaced [62]. Low-cost enzyme immobilization technologies are becoming widely-adopted, for example, cross-linking enzyme aggregate (CLEA) [78][79][80] and cellulose-binding module-tagged (CBM-tagged) protein immobilization [74,[81][82][83][84].…”
Section: Sypab Challenges and Opportunitiesmentioning
Abstract:The hydrogen economy presents an appealing energy future but its implementation must solve numerous problems ranging from low-cost sustainable production, high-density storage, costly infrastructure, to eliminating safety concern. The use of renewable carbohydrate as a high-density hydrogen carrier and energy source for hydrogen production is possible due to emerging cell-free synthetic biology technology-cell-free synthetic pathway biotransformation (SyPaB
“…Este tipo de processo emprega enzimas purificadas ou células íntegras, em especial, células microbianas livres ou imobilizadas e apresenta notável destaque como uma tecnologia suplementar útil para a indústria química, fornecendo em alguns casos, reações que não são facilmente conduzidas pela química orgânica clássica ou, em outros casos, promovendo reações que podem substituir etapas químicas severas. [1][2] Adicionalmente, outros atributos benéficos da biotransformação incluem versatilidade reacional, especificidade, redução no número de etapas no processo e alto rendimento. 3 Diferente da fermentação, na biotransformação o biocatalisador transforma molé-culas precursoras pré-formadas (naturais ou sintéticas) em limitado número de etapas.…”
“…Some biotransformations mediated by a single enzyme have been implemented on industrial scales. For example, fructose is produced from glucose as catalyzed by glucose isomerase (Bhosale et al, 1996;Vasic-Racki, 2006), and beta-lactam antibiotics are semi-synthesized by amidases (Demain, 2004;Vasic-Racki, 2006). Relatively complicated chemical reactions can be mediated by multi-enzymes in one pot, for example, cellulose hydrolysis by the synergetic action of endoglucanase, cellobiohydrolase, and beta-glucosidase (Zhang and Lynd, 2004), synthesis of chiral alcohols with NAD(P)H regeneration (Hummel, 1999;Wichmann and Vasic-Racki, 2005), synthesis of carbohydrates (Meyer et al, 2007;Shaeri et al, 2008), and biosynthesis of polymers (Chi et al, 2008).…”
Cell-free synthetic (enzymatic) pathway biotransformation (SyPaB) is the assembly of a number of purified enzymes (usually more than 10) and coenzymes for the production of desired products through complicated biochemical reaction networks that a single enzyme cannot do. Cell-free SyPaB, as compared to microbial fermentation, has several distinctive advantages, such as high product yield, great engineering flexibility, high product titer, and fast reaction rate. Biocommodities (e.g., ethanol, hydrogen, and butanol) are low-value products where costs of feedstock carbohydrates often account for $30-70% of the prices of the products. Therefore, yield of biocommodities is the most important cost factor, and the lowest yields of profitable biofuels are estimated to be ca. 70% of the theoretical yields of sugar-to-biofuels based on sugar prices of ca. US$ 0.18 per kg. The opinion that SyPaB is too costly for producing low-value biocommodities are mainly attributed to the lack of stable standardized building blocks (e.g., enzymes or their complexes), costly labile coenzymes, and replenishment of enzymes and coenzymes. In this perspective, I propose design principles for SyPaB, present several SyPaB examples for generating hydrogen, alcohols, and electricity, and analyze the advantages and limitations of SyPaB. The economical analyses clearly suggest that developments in stable enzymes or their complexes as standardized parts, efficient coenzyme recycling, and use of low-cost and more stable biomimetic coenzyme analogs, would result in much lower production costs than do microbial fermentations because the stabilized enzymes have more than 3 orders of magnitude higher weight-based total turn-over numbers than microbial biocatalysts, although extra costs for enzyme purification and stabilization are spent.
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