Reversible histone acetylation plays an important role in regulation of chromatin structure and function. Here, we report that the human orthologue of Drosophila melanogaster MOF, hMOF, is a histone H4 lysine K16-specific acetyltransferase. hMOF is also required for this modification in mammalian cells. Knockdown of hMOF in HeLa and HepG2 cells causes a dramatic reduction of histone H4K16 acetylation as detected by Western blot analysis and mass spectrometric analysis of endogenous histones. We also provide evidence that, similar to the Drosophila dosage compensation system, hMOF and hMSL3 form a complex in mammalian cells. hMOF and hMSL3 small interfering RNA-treated cells also show dramatic nuclear morphological deformations, depicted by a polylobulated nuclear phenotype. Reduction of hMOF protein levels by RNA interference in HeLa cells also leads to accumulation of cells in the G 2 and M phases of the cell cycle. Treatment with specific inhibitors of the DNA damage response pathway reverts the cell cycle arrest caused by a reduction in hMOF protein levels. Furthermore, hMOF-depleted cells show an increased number of phospho-ATM and ␥H2AX foci and have an impaired repair response to ionizing radiation. Taken together, our data show that hMOF is required for histone H4 lysine 16 acetylation in mammalian cells and suggest that hMOF has a role in DNA damage response during cell cycle progression.Nucleosomes composed of DNA and histones define the fundamental structural unit of chromatin, which acts as a scaffold for nuclear processes such as transcription and replication. By modifying the nucleosomal structure in several ways, the chromatinized DNA can be made either more or less accessible. Alterations to chromatin structure are usually brought about in three different ways: by ATP-dependent remodeling of nucleosomes, by replacement of standard histones with histone variants, and by covalently modifying the N-terminal tails of histones. Histone modifications include acetylation, phosphorylation, methylation, ubiquitination, sumoylation, and poly(ADP-ribosyl)ation (for a review, see reference 54). Histone acetylation is the best-characterized modification and is controlled by histone acetyltransferases (HATs) and histone deacetylases.Sequence analysis of HAT proteins reveal that they can be classified in distinct families, with each family having a characteristic substrate specificity (12). GNAT (GCN5-related Nacetyltransferases) family members mainly acetylate lysines on the histone H3 tail. The founding members of the other family, MYST, include Saccharomyces cerevisiae Ybf2p/Sas3p and Sas2p and human MOZ and Tip60 (56). The MYST homology domain is exceptionally well conserved among all family members. This region includes the acetyl coenzyme A binding domain similar to the one found in GNAT acetyltransferases (41) as well as a C 2 HC-type zinc finger. Recently, the crystal structure of Esa1, an essential yeast HAT, showed that even though the MYST and GNAT family share sequence homology only in motif A, there...