Achieving the desired performance in terms of activity and durability toward oxygen reduction reaction (ORR) is a grand challenge for ruthenium (Ru) selenides. In this work, by regulating the molar ratio of selenium (Se) to Ru (1.5 ≤ Se/Ru ≤ 3.5), a facile method involving a simple microwave route followed by heat treatment was developed to synthesize cubic RuSe 2 /C electrocatalysts. A mixed phase of predominant cubic RuSe 2 with minor hexagonal Ru was identified for RuSe 2 /C (Se/Ru ≤ 2.0) catalysts, while a mixed phase of predominant cubic RuSe 2 with minor hexagonal Se for RuSe 2 /C (Se/Ru ≥ 2.5) catalysts. A slightly Se-rich (Se/Ru ≤ 2.5) surface would prevent RuSe 2 nanoparticles from growing, while too much Se (Se/Ru ≥ 3.0) would cause the aggregation of RuSe 2 nanoparticles. The RuSe 2 /C catalyst prepared using Se/Ru = 2.5 demonstrated the best ORR activity, showing the half-wave potentials of 0.71 and 0.77 V in HClO 4 and KOH solutions, respectively, with excellent methanol tolerance. Furthermore, this best-performed catalyst delivered a maximum power density of 353 mW•cm −2 at 1600 mA•cm −2 when tested as a cathode catalyst in a H 2 / O 2 single cell with an impressive Ru utilization of 1961 mW•mg −1 . Fuel cell performance decayed by 33.7% after holding the current density at 400 mA•cm −2 for 55 h, which might be attributed to the severe aggregation of RuSe 2 nanoparticles and harmful Se migration from the cathode side to the anode side, resulting from the dissolution of Se from the catalyst surface.