Transcriptional activity of heat shock (hsp) genes is controlled by a heat-activated, group-specific transcription factor(s) recognizing arrays of inverted repeats of the element NGAAN. To date genes for two human factors, HSF1 and HSF2, have been isolated. To define their properties as well as the changes they undergo during heat stress activation, we prepared polyclonal antibodies to these factors. Using these tools, we have shown that human HeLa cells constitutively synthesize HSF1, but we were unable to detect HSF2. In unstressed cells HSF1 is present mainly in complexes with an apparent molecular mass of about 200 kDa, unable to bind to DNA. Heat treatment induces a shift in the apparent molecular mass of HSF1 to about 700 kDa, concomitant with the acquisition of DNA-binding ability. Cross-linking activation of transcription of hsp genes is indeed mediated by denatured proteins (4), suggesting protein denaturation as the common denominator of many of the disparate treatments inducing the response. Earlier studies have also suggested that hsp gene expression may be subject to autoregulation (15). In concordance with findings that members of the hsp7O family of proteins are capable of binding to denatured proteins and peptides (18,36,38), as well as of associating with nascent polypeptides (8), several recent studies showing down-regulation of the transcriptional stress response following overexpression of hsp7O (52) and the propensity of hsp7O to directly bind HSF (2, 7) have implicated hsp70 as the autoregulatory factor. After the cloning of HSF genes from a variety of organisms (13, 41, 43-45, 51, 63), support for a negative mode of regulation of HSF activity has come from observations of constitutive transcriptional activity of mutated Saccharomyces cerevisiae HSF (9, 35) and of constitutive DNA-binding activity of wild-type Drosophila and human HSF expressed in bacteria (13,41,45). Further evidence for such a regulatory mechanism has been provided by experiments showing that derepression of DNA-binding activity of human HSF can be reproduced in vitro by treatment with heat (33; see reference 13 for analogous experiments with Drosophila cells) and with agents affecting protein conformation (34). Surprisingly, considering the divergence of transcriptional mechanisms, quite analogous findings concerning the role of denatured proteins in triggering the stress response (21) and its autoregulation by hsp7O (DnaK) and other hsps (20,(53)(54)(55)(56) were made with bacteria.The second question with which this study is mainly concerned is directed toward the biochemical analysis of molecular events occurring when HSF is converted from an