We investigated whether there is endogenous acetylcholine (ACh) release in the preBötzinger Complex (preBötC), a medullary region hypothesized to contain neurons generating respiratory rhythm, and how endogenous ACh modulates preBötC neuronal function and regulates respiratory pattern. Using a medullary slice preparation from neonatal rat, we recorded spontaneous respiratory-related rhythm from the hypoglossal nerve roots (XIIn) and patch-clamped preBötC inspiratory neurons. Unilateral mi-croinjection of physostigmine, an acetylcholinesterase inhibitor, into the preBötC increased the frequency of respiratory-related rhythmic activity from XIIn to 116±13% (mean±S.D.) of control. Ipsilateral physostigmine injection into the hypoglossal nucleus (XII nucleus) induced tonic activity, increased the amplitude and duration of the integrated inspiratory bursts of XIIn to 122±17% and 117±22% of control respectively; but did not alter frequency. In pre-BötC inspiratory neurons, bath application of physostigmine (10 μM) induced an inward current of 6.3±10.6 pA, increased the membrane noise, decreased the amplitude of phasic inspiratory drive current to 79±16% of control, increased the frequency of spontaneous excitatory postsynaptic currents to 163±103% and decreased the whole cell input resistance to 73±22% of control without affecting the threshold for generation of action potentials. Bath application of physostigmine concurrently induced tonic activity, increased the frequency, amplitude and duration of inspiratory bursts of XIIn motor output. Bath application of 4-diphenylacetoxy-Nmethylpiperidine methiodide (4-DAMP, 2 μM), a M3 muscarinic acetylcholine receptor (mAChR) selective antagonist, increased the input resistance of preBötC inspiratory neurons to 116±9% of control and blocked all of the effects of physostigmine except for the increase in respiratory frequency. Dihydro-β-erythroidine (DH-β-E; 0.2 μM), an α4β2 nicotinic receptor (nAChR) selective antagonist, blocked all the effects of physostigmine except for the increase in inspiratory burst amplitude. In the presence of both 4-DAMP and DH-β-E, physostigmine induced opposite effects, i.e. a decrease in frequency and amplitude of XIIn rhythmic activity. These results suggest that there is cholinergic neurotransmission in the preBötC which regulates respiratory frequency, and in XII nucleus which regulates tonic activity, and the amplitude and duration of inspiratory bursts of XIIn in neonatal rats. Physiologically relevant levels of ACh release, via mAChRs antagonized by 4-DAMP and nAChRs antagonized by DH-β-E, modulate the excitability of Cholinergic neurotransmission is integral to a variety of brain functions including regulation of breathing. Physostigmine intravenously infused in rabbits increases respiratory rate, probably by raising the concentration of acetylcholine (ACh) in the central nervous system (CNS) (Weinstock et al., 1981). Application of physostigmine to the en bloc brainstemspinal cord preparation from the neonatal rat (Smith and Feldma...