To investigate possible species-specificity of aryl hydrocarbon receptor (AhR)-mediated signal transduction pathways, activities of 2,3,7,8-tetrochlorodibenzo-p-dioxin (TCDD) and six synthetic flavonoids were evaluated in mouse hepatoma and guinea pig adenocarcinoma cells transfected with an AhR-responsive luciferase reporter. Rank order potency in these two cell lines was similar for the ability of these flavonoids to antagonize TCDDinduced reporter gene expression. However, in the presence of flavone alone, a species-specific difference in agonist activity was observed. In guinea pig cells, several flavonoids demonstrated agonist activity up to 50% of the maximum TCDD response. In mouse cells, however, no significant agonist activity was observed at the same concentrations based on luciferase enzyme activity, protein expression, and mRNA analysis. Moreover, competitive ligand-binding assays, using [ 3 H]TCDD in cytosolic fractions, demonstrated that 3Ј-methoxy-4Ј-nitroflavone had a similar IC 50 in both recombinant cell lines, suggesting that the flavone has similar binding affinity to receptors from both species. However, electrophoretic mobility shift assay using the cytosolic fractions demonstrated that this flavone elicited binding to the DRE by guinea pig but not mouse AhR complex. The dependence of the AhR in this differential interaction was further demonstrated using in vitro synthesized guinea pig and mouse Ah receptors and mouse Arnt. Together, these data suggest that the differential agonist/antagonist activity of these flavone derivatives is caused by the efficacy of these flavonoids in eliciting an AhR conformation that recognizes regulatory response elements in a species-specific manner.The aryl hydrocarbon receptor (AhR), a member of the basic helix-loop-helix protein superfamily, is a ligand-activated transcription factor (Swanson and Bradfield, 1993;Schmidt and Bradfield, 1996). Ligand-free AhR resides in the cytosol as a complex associated with the 90-kDa heat shock protein and several other proteins (Kazlauskas et al., 1999;Whitlock, 1999). Ligand-elicited activation [e.g., 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD)] promotes the receptor to undergo a series of processes involving dissociation from cytosolic chaperones, translocation to the nucleus, association with the AhR nuclear translocation partner (Arnt), recognition of the dioxin responsive element (DRE), and modification of gene transcription (Denison et al., 1989;Dong et al., 1996).Among a variety of species, the AhR possesses similar physiochemical properties, and the interaction between TCDD-bound AhR and DRE has been demonstrated to be highly conserved for AhR-mediated signal transduction (Bank et al., 1992). Nevertheless, significant species-, strain-, tissue-, and developmental stage-specific differences are common features in TCDD responsiveness (Ema et al., 1994;Dohr et al