SummaryUsing a genome-wide association study, we found that common inter-individual differences in haemoglobin A 2 (HbA 2 , a 2 d 2 ) levels are largely governed by genetic factors (42% of variability). The influence of age (1%) and sex (4%) was small. HbA 2 levels were influenced by two loci: the HBS1L-MYB locus on chromosome 6q, which has been shown to have pleiotropic effects on other haematological traits; and a second locus surrounding HBB, the gene encoding b-globin. Our results suggest that HbA 2 levels in adults are influenced by two different biological processes: one via kinetics of erythropoiesis, and the other, via competition between HBB and HBD activity.