Haplotype-resolved gapless genome and chromosome segment substitution lines facilitate gene identification in wild rice
Jingfen Huang,
Yilin Zhang,
Yapeng Li
et al.
Abstract:The abundant genetic variation harbored by wild rice (Oryza rufipogon) has provided a reservoir of useful genes for rice breeding. However, the genome of wild rice has not yet been comprehensively assessed. Here, we report the haplotype-resolved gapless genome assembly and annotation of wild rice Y476. In addition, we develop two sets of chromosome segment substitution lines (CSSLs) using Y476 as the donor parent and cultivated rice as the recurrent parents. By analyzing the gapless reference genome and CSSL p… Show more
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