Habitat-related specifity of iPBS fingerprint in European populations of <i>Hedera helix</i> L.

Žiarovská, Jana; Ražná, Katarí­na; Lojka, Bohdan; Bošeľová, Danka; Kyseľ, Matúš

doi:10.2478/foecol-2019-0005

Cited by 2 publications

(1 citation statement)

References 39 publications

(37 reference statements)

Supporting

Mentioning

Contrasting

Order By: Relevance

“…Previously, different molecular methods have revealed the high genetic diversity, genetic variation, polymorphism in the common ivy plant. Molecular markers coupled with statistical analyses have deciphered the population structure in H. helix populations (Boselova & Ziarovska 2016;Li et al 2021;Ziarovska et al 2019). The current study methods and findings are novel due to the application of morphometric methods to disentangle the genetic diversity and population structure in the H. helix population.…”

Section: Discussionmentioning

confidence: 99%

ISSR markers and morphometry determine genetic diversity and population structure in Hedera helix L.

Shakoor¹,

Zaib²,

Zhao³

et al. 2022

CZECH J GENET PLANT

View full text Add to dashboard Cite

Hedera helix L. is an invasive, but medicinally important plant. In Iran, there is no available study on the H. helix population to reveal the genetic diversity and population structure. Fifty-six individual plants belonging to nine geographical populations were collected in four provinces of Iran. High genetic diversity, polymorphisms, and a Shannon diversity index of 0.269 were detected in Mazandaran, Kandovan (Population 3). Analysis of the molecular variance indicated 40% of total genetic variation of the whole population was present in the subpopulation. A high genetic similarity (0.922) between plant Populations 5 (Kermanshah; Islamabad) and 6 (Kermanshah; Paveh) was noted. On the other hand, a low genetic similarity was observed between plant Populations 1 (Tehran; Darband) and 8 (Ardabil; Hur). The Mantel test revealed a correlation between the genetic and geographical distances. Furthermore, it demonstrated the isolation mechanism responsible for the population structure in the H. helix plant populations. The principal component analysis explained the majority of the variation in the morphological characteristics. Three components explained 87% of the variation, and the first component explained 60% of the variation. For instance, the leaf morphology showed a correlation of > 0.7 between leaf morphological and floral characters. The plant leaves and quantitative flower characteristics separated the plant populations according to the differences in length. The current results have implications for plant conservation and management.

show abstract

Section: Discussionmentioning

confidence: 99%

ISSR markers and morphometry determine genetic diversity and population structure in Hedera helix L.

Shakoor¹,

Zaib²,

Zhao³

et al. 2022

CZECH J GENET PLANT

View full text Add to dashboard Cite

show abstract

GENOMIC FINGERPRINTS OF ARACHIS HYPOGAEA L. NATURAL GERMPLASM AS REVEALED BY iPBS MARKERS

Montero-Torres¹

2021

J microb biotech food sci

View full text Add to dashboard Cite

Arachis hypogaea, L. is an oil seed crop with a worldwide importance and the seeds are eaten at one of several stages from immature to fully ripe, raw, or cooked. The aim of the study was to analyze specific iPBS fingerprints of twenty-one accessions of peanut that were collected in the places of their natural occurrence in Bolivia and describe the existing genetic polymorphism. For genomic imprinting, three different iPBS markers were chosen - 1882, 2079, 2274 and a PCR reactions were performed. Obtained iPBS fingerprints were evaluated for the presence/absence of individual amplified loci and scored in 1/0 matrices. A Jaccard coefficient of genetic similarity was applied in UPGMA analysis for dendrogram construction. Polymorphism level was achieved in the range from 48% up to the 75% per primer. None of the iPBS markers used in the study was considered to distinguish all of the analyzed peanut accessions, but combining them in the final analysis, the level of genomic polymorphism was sufficient to clear separating of iPBS fingerprints of the collected accessions and unique iPBS loci were recorded in genomes of some of them. We found that, by selecting the appropriate iPBS markers, it is possible to characterize the peanut genome in the individual level with a specific fingerprint.

show abstract

Habitat-related specifity of iPBS fingerprint in European populations of Hedera helix L.

Cited by 2 publications

References 39 publications

ISSR markers and morphometry determine genetic diversity and population structure in Hedera helix L.

ISSR markers and morphometry determine genetic diversity and population structure in Hedera helix L.

GENOMIC FINGERPRINTS OF ARACHIS HYPOGAEA L. NATURAL GERMPLASM AS REVEALED BY iPBS MARKERS

Contact Info

Product

Resources

About