Despite new therapeutic options, treatment of steroid-refractory chronic graft-versus-host disease (SR-cGVHD) remains challenging as organ involvement and clinical manifestations are highly variable. In previous trials of low-dose interleukin-2 (LD IL-2), we established the safety and efficacy of LD IL-2 for treatment of SR-cGVHD. In the present report, we combined 5 phase I or II clinical trials conducted at our center to investigate organ-specific response rate, co-involvement of organs, predictors of organ-specific response and its possible association with immune response. For 105 adult patients included in this report, the overall response rate after 8 or 12 weeks LD IL-2 was 48.6% and 53.3% including late responses in patients who continued treatment for extended periods. Skin was the most frequent organ involved (84%) and the organ-specific response rate was highest in liver (66.7%) followed by GI (62.5%), skin (36.4%), joint/muscle/fascia (34.2%) and lung (19.2%). In multivariable analysis, shorter time from diagnosis of cGVHD to IL-2 initiation, shorter time from transplant to IL-2 initiation, and fewer prior therapies were associated with overall response as well as skin response. For immunologic correlates, CD4Treg:CD4Tcon ratio at one week was significantly higher in patients with overall and skin response; skin response was significantly associated with lower number of total CD3 T cells, CD4Tcon and CD8 T cells and higher number of B cells. For lung responders, terminal effector memory cell counts were lower within all T cell populations compared to non-responders. Organ-specific mechanisms of injury should be investigated and organ-specific targeted therapies need to be developed.