2017
DOI: 10.1016/j.ejmech.2016.10.016
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Green fluorescent protein chromophore derivatives as a new class of aldose reductase inhibitors

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Cited by 13 publications
(15 citation statements)
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“…A possible criticism is that the GOLD analysis should consider "flexible" dockings using the software's Side Chain Flexibility function, but we previously demonstrated that the better method for predicting an appropriate protein structure that accounts for experimental results is assessment of the docking score-pIC 50 correlation. 38) Docking positions for 1a-c and 2a-c with 4IGS demonstrated that 2a, which exhibited the lowest inhibitory activity of the examined botryllazine A derivatives, was predicted to assume a different position relative to the other derivatives (Fig. 4).…”
Section: Resultsmentioning
confidence: 99%
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“…A possible criticism is that the GOLD analysis should consider "flexible" dockings using the software's Side Chain Flexibility function, but we previously demonstrated that the better method for predicting an appropriate protein structure that accounts for experimental results is assessment of the docking score-pIC 50 correlation. 38) Docking positions for 1a-c and 2a-c with 4IGS demonstrated that 2a, which exhibited the lowest inhibitory activity of the examined botryllazine A derivatives, was predicted to assume a different position relative to the other derivatives (Fig. 4).…”
Section: Resultsmentioning
confidence: 99%
“…33,34) The ChemPLP scoring function 35) was used to predict docking poses for each of the six specificity pocket states, and these were then rescored using the Astex Statistical Potential (ASP) 36) scoring function, validated for protein-ligand specific hydrogen bond scoring. 37) The combination of these scores was used to determine the optimal pose of each ligand (i.e., for which both scoring functions yielded positive, high scores) ( Table 4).…”
Section: Resultsmentioning
confidence: 99%
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“…The oxazolones shown in Figure were prepared following methods reported in the bibliography . A wide array of substrates was synthesized to cover the maximum number of possibilities, and the orthopalladation of all ligands was attempted.…”
Section: Resultsmentioning
confidence: 99%
“…HRMS and ESI (ESI+) mass spectra were recorded using an MicroToF Q, API‐Q‐ToF ESI with a mass range from 20 to 3000 m/z and mass resolution of 15000 (FWHM). The oxazolones containing the phenyl ring in the 2‐position ( 1a – 1i ), those containing the methyl group in the 2‐position ( 1j – 1o ), and the oxidation reagent PhICl 2 were prepared by reported procedures. Compounds 2l , 2n and 2o were prepared as described previously .…”
Section: Methodsmentioning
confidence: 99%