Genomic insights into longan evolution from a chromosome-level genome assembly and population genomics of longan accessions

Wang, J; Li, Jian; Z, Li; B, Liu; Zhang, L; Guo, Dan; Huang, Sanwen; Qian, Wei; Guo, Li

doi:10.1101/2021.05.27.445741

Cited by 1 publication

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“…Longan (Dimocarpus longan) is a subtropical perennial crop, and it is best known for its nutritious fruit, which has a relatively high medicinal value [1]. A stable annual yield is the most important factor affecting the healthy development of the longan industry.…”

Section: Introductionmentioning

confidence: 99%

A comparative proteomic analysis provides insight into the molecular mechanism of bud break in longan

et al. 2022

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Background The timing of bud break is very important for the flowering and fruiting of longan. To obtain new insights into the underlying regulatory mechanism of bud break in longan, a comparative analysis was conducted in three flower induction stages of two longan varieties with opposite flowering phenotypes by using isobaric tags for relative and absolute quantification (iTRAQ). Results In total, 3180 unique proteins were identified in 18 samples, and 1101 differentially abundant proteins (DAPs) were identified. “SX” (“Shixia”), a common longan cultivated variety that needs an appropriate period of low temperatures to accumulate energy and nutrients for flower induction, had a strong primary inflorescence, had a strong axillary inflorescence, and contained high contents of sugars, and most DAPs during the bud break process were enriched in assimilates and energy metabolism. Combined with our previous transcriptome data, it was observed that sucrose synthase 6 (SS6) and granule-bound starch synthase 1 (GBSSI) might be the key DAPs for “SX” bud break. Compared to those of “SX”, the primary inflorescence, axillary inflorescence, floral primordium, bract, and prophyll of “SJ” (“Sijimi”) were weaker. In addition, light, rather than a high sugar content or chilling duration, might act as the key signal for triggering bud break. In addition, catalase isozyme 1, an important enzyme in the redox cycle, and RuBisCO, a key enzyme in the Calvin cycle of photosynthetic carbon assimilation, might be the key DAPs for SJ bud break. Conclusion Our results present a dynamic picture of the bud break of longan, not only revealing the temporal specific expression of key candidate genes and proteins but also providing a scientific basis for the genetic improvement of this fruit tree species.

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Section: Introductionmentioning

confidence: 99%