Genome‐wide development of
            <scp>microRNA</scp>
            ‐based
            <scp>SSR</scp>
            markers in
            <i>Medicago truncatula</i>
            with their transferability analysis and utilization in related legume species

Liu, Wenxian; Min, Xueyang; Wang, Yanrong

doi:10.1002/9781119409144.ch121

Cited by 3 publications

(2 citation statements)

References 41 publications

(20 reference statements)

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“…A number of DNA-based molecular markers viz; SSR (Simple sequence repeats),microRNA-based SSR, AFLP (Amplified fragment length polymorphism), SNP (Single Nucleotide Polymorphisms), etc. are available for diversity analysis and identification of most potential genotypes for desirable traits in different plants ( Gupta et al, 2013 ; Maurya et al, 2015 ; Liu et al, 2019 ; Gupta et al, 2020a ; Pradeepkumara et al, 2022 ) that would be useful to detect most potential genotypes based on phylogeny and genetics studies for particular genotype-specific microgreens. Nutritional profiling of the most diverse genotypes (range: 300–1,000 genotypes) for microgreen-related traits may be performed to detect major phytonutrient components.…”

Section: Strategies To Overcome Limitations Of Microgreen Productionmentioning

confidence: 99%

Prospects of microgreens as budding living functional food: Breeding and biofortification through OMICS and other approaches for nutritional security

Gupta

Sharma

Singh³

et al. 2023

Front. Genet.

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Nutrient deficiency has resulted in impaired growth and development of the population globally. Microgreens are considered immature greens (required light for photosynthesis and growing medium) and developed from the seeds of vegetables, legumes, herbs, and cereals. These are considered “living superfood/functional food” due to the presence of chlorophyll, beta carotene, lutein, and minerals like magnesium (Mg), Potassium (K), Phosphorus (P), and Calcium (Ca). Microgreens are rich at the nutritional level and contain several phytoactive compounds (carotenoids, phenols, glucosinolates, polysterols) that are helpful for human health on Earth and in space due to their anti-microbial, anti-inflammatory, antioxidant, and anti-carcinogenic properties. Microgreens can be used as plant-based nutritive vegetarian foods that will be fruitful as a nourishing constituent in the food industryfor garnish purposes, complement flavor, texture, and color to salads, soups, flat-breads, pizzas, and sandwiches (substitute to lettuce in tacos, sandwich, burger). Good handling practices may enhance microgreens’stability, storage, and shelf-life under appropriate conditions, including light, temperature, nutrients, humidity, and substrate. Moreover, the substrate may be a nutritive liquid solution (hydroponic system) or solid medium (coco peat, coconut fiber, coir dust and husks, sand, vermicompost, sugarcane filter cake, etc.) based on a variety of microgreens. However integrated multiomics approaches alongwith nutriomics and foodomics may be explored and utilized to identify and breed most potential microgreen genotypes, biofortify including increasing the nutritional content (macro-elements:K, Ca and Mg; oligo-elements: Fe and Zn and antioxidant activity) and microgreens related other traits viz., fast growth, good nutritional values, high germination percentage, and appropriate shelf-life through the implementation of integrated approaches includes genomics, transcriptomics, sequencing-based approaches, molecular breeding, machine learning, nanoparticles, and seed priming strategiesetc.

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Section: Strategies To Overcome Limitations Of Microgreen Productionmentioning

confidence: 99%

Prospects of microgreens as budding living functional food: Breeding and biofortification through OMICS and other approaches for nutritional security

Gupta

Sharma

Singh³

et al. 2023

Front. Genet.

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“…Legume cropping is expanding to warmer regions, and suitable for legume integration into annual cropping systems (Stagnari et al 2017). Subsequently, in cropping systems legumes play a significant role in ensuring food security for rising population (Foyer et al 2016;Considine et al 2017;Liu et al 2019).…”

Section: Introductionmentioning

confidence: 99%

Role of Gamma Amino Butyric Acid (GABA) against abiotic stress tolerance in legumes: a review

Sita

Kumar²

2020

Plant Physiol. Rep.

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Legumes are well known for their nutritional and health benefits as well as for their impact in the sustainability of agricultural systems. Under current scenarios threatened by climate change highlights the necessity for concerted research approaches in order to develop crops that are able to cope up with environmental challenges. Various abiotic stresses such as cold, heat, drought, salt, and heavy metal induce a variety of negative effects in plant growth, development and significantly decline yield and quality. Plant growth regulators or natural products of plants are reported to be effective to improve plant tolerance to several abiotic stresses. Gamma Amino Butyric Acid (GABA) is a non-protein amino acid involved in various metabolic processes, and partially protects plants from abiotic stress. GABA appears to impart partial protection to various abiotic stresses in most plants by increasing leaf turgor, increased osmolytes and reduced oxidative damage by stimulation of antioxidants. We have compiled various scientific reports on the role and mechanism of GABA in plants against coping with various environmental stresses. We have also described the emerging information about the metabolic and signaling roles of GABA which is being used to improve legume crop against abiotic stress.

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In silico analysis of key regulatory networks related to microfibril angle in Populus trichocarpa Hook.

et al. 2022

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Dissection of regulatory network that control wood structure is highly challenging in functional genomics. Nevertheless, due to the availability of genomic, transcriptomic and proteomic sequences, a large amount of information is available for use in achieving this goal. MicroRNAs, which compose a class of small non-coding RNA molecules that inhibit protein translation by targeting mRNA cleavage sites and thus regulate a wide variety of developmental and physiological processes in plants, are important parts of this regulatory network. These findings and the availability of sequence information have made it possible to carry out an in silico analysis to predict and annotate miRNAs and their target genes associated with an important factor affecting wood rigidity, microfibril angle (MFA), throughout the Populus trichocarpa Hook. genome. Our computational approach revealed miRNAs and their targets via ESTs, sequences putatively associated with microfibril angle. In total, 250 miRNAs were identified as RNA molecules with roles in the silencing and post-transcriptional regulation of the expression of nine genes. We found SHY2, IAA4 (ATAUX2–11), BZIP60, AP2, MYB15, ABI3, MYB17, LAF1 and MYB28 as important nodes in a network with possible role in MFA determination. Other co-expressed genes putatively involved in this regulatory system were also identified by construction of a co-expression network. The candidate genes from this study may help unravel the regulatory networks putatively linked to microfibril angle.

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Genome‐wide development of microRNA ‐based SSR markers in Medicago truncatula with their transferability analysis and utilization in related legume species

Cited by 3 publications

References 41 publications

Prospects of microgreens as budding living functional food: Breeding and biofortification through OMICS and other approaches for nutritional security

Prospects of microgreens as budding living functional food: Breeding and biofortification through OMICS and other approaches for nutritional security

Role of Gamma Amino Butyric Acid (GABA) against abiotic stress tolerance in legumes: a review

In silico analysis of key regulatory networks related to microfibril angle in Populus trichocarpa Hook.

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