2017
DOI: 10.1038/jhg.2016.160
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Genome-wide association study using the ethnicity-specific Japonica array: identification of new susceptibility loci for cold medicine-related Stevens–Johnson syndrome with severe ocular complications

Abstract: A genome-wide association study (GWAS) for cold medicine-related Stevens-Johnson syndrome (CM-SJS) with severe ocular complications (SOC) was performed in a Japanese population. A recently developed ethnicity-specific array with genome-wide imputation that was based on the whole-genome sequences of 1070 unrelated Japanese individuals was used. Validation analysis with additional samples from Japanese individuals and replication analysis using samples from Korean individuals identified two new susceptibility lo… Show more

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Cited by 21 publications
(22 citation statements)
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“…In Japanese individuals, the HLA‐A*3101 allele has been suggested to be a risk factor for carbamazepine‐induced severe CADR . Furthermore, a recent genome‐wide association study has identified genetic predictors for cold medicine‐related SJS with severe ocular complications in a Japanese population . Ethosuximide, an antiepileptic, is mainly used to control absence seizures .…”
Section: Discussionmentioning
confidence: 99%
See 1 more Smart Citation
“…In Japanese individuals, the HLA‐A*3101 allele has been suggested to be a risk factor for carbamazepine‐induced severe CADR . Furthermore, a recent genome‐wide association study has identified genetic predictors for cold medicine‐related SJS with severe ocular complications in a Japanese population . Ethosuximide, an antiepileptic, is mainly used to control absence seizures .…”
Section: Discussionmentioning
confidence: 99%
“…7 Furthermore, a recent genome-wide association study has identified genetic predictors for cold medicinerelated SJS with severe ocular complications in a Japanese population. 8 Ethosuximide, an antiepileptic, is mainly used to control absence seizures. 9 Unlike other anticonvulsants, only one case has been reported as ethosuximide-induced SJS.…”
Section: Discussionmentioning
confidence: 99%
“…43 HLA-A*02:06 with Rec114 rs16957893 CG also exerted more than additive effects in CM-SJS/TEN with SOC (OR ¼ 110 [95% CI, 6.36-1905], P ¼ 4.45 3 10 À8 ). 6 This interaction was independent of the interaction between HLA-A*02:06 and TLR3 rs3775296 T/T because Japanese CM-SJS/TEN with SOC patients with both HLA-A*02:06 and Rec114 rs16957893 CG did not harbor TLR3 rs3775296 T/T. 6 In the Japanese, combined genotyping for the associated variants thus far identified (i.e., HLA-A*02:06, Rec114 rs16957893 CG, TLR3 rs3775296 T/T, and PTGER3 rs1327464 GA or AA) may help to predict the risk for CM-SJS/TEN with SOC.…”
Section: Interaction Between the Hla Genotype And Susceptibility Genesmentioning
confidence: 99%
“…Our ophthalmologic diagnosis of SJS/TEN was based on a confirmed history of acuteonset high fever, serious mucocutaneous illness with skin eruptions, and involvement of at least two mucosal sites including the ocular. [2][3][4][5][6][7][8] SJS/TEN patients with severe ocular complications (SOC) in the acute stage often suffer severe ocular sequelae such as vision loss and very severe dry eye that prevent their having a normal life. 9 We defined acute-stage SOC as a condition with severe conjunctivitis with pseudomembrane and epithelial defects on the ocular surface (cornea and/or conjunctiva), 10 and chronicstage as a condition with ocular sequelae such as severe dry eye, trichiasis, symblepharon, and conjunctival invasion into the cornea.…”
mentioning
confidence: 99%
“…This new array will foster genetic and epidemiological research with the aim to improve health across diverse African populations. Recently, other arrays have become available, specific for Hispanic, African-American or Japanese [22] populations. In addition, further development of GWAS arrays together with increased availability of reference datasets generated by next generation sequencing from diverse populations, may improve HLA imputation methods.…”
mentioning
confidence: 99%