Genome Classification of Musa cultivars from Northeast India as Revealed by ITS and IRAP Markers

Lalrinfela, Pachuau; Atom, Annupama Devi; Thangjam, Robert

doi:10.1007/s12010-014-0827-0

Cited by 16 publications

(7 citation statements)

References 24 publications

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“…The genetic relationships and diversity among banana accessions have been extensively studied using morphological characters (Heslop-Harrison and Schwarzacher 2007;Sukartini 2007;Rinaldi et al 2014;Fitriyah et al 2017), RAPD markers (Kaemmer 1992;Howell et al 1994;Jain et al 2007), RFLP markers (Gawel and Jarret 1991;Jarret et al 1992;Nwakanma et al 2003;Raboin et al 2005), SSR/ISSR markers (Creste et al 2006;Retnoningsih 2009;Qin et al 2011), AFLP markers (Wong et al 2002;Noyer et al 2005;Wongniam et al 2010), microsatellite markers (Wahyuningtyas et al 2009), ITS and IRAP Markers (Pachuau et al 2014), and sequencing (Aert et al 2004;Cheung and Town 2007;D'Hont et al 2012;Davey et al 2013). All genetic diversity analysis place M. acuminata and M. balbisiana in the different pool/group separated in very far genetic distance (low similarities) since they are from different species, whereas their interspecific-hybrids, referred as M. paradisiaca, are occupied in between of them (Espino et al 1992 ).…”

Section: Diversity Analysismentioning

confidence: 99%

Genome group classification and diversity analysis of talas and rutai banana, two local cultivars from East Kalimantan, based on morphological characters

2019

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Abstract. Sunaryo W, Mulyadi A, Nurhasanah. 2019. Genome group classification and diversity analysis of talas and rutai banana, two local cultivars from East Kalimantan, based on morphological characters. Biodiversitas 20: 2355-2367. Talas and rutai banana are two local cultivars grown in East Kalimantan and long-time used as dessert or cooking bananas for traditional food and cakes, but unfortunately, their taxonomic and genetic status are still little known. This study was conducted to explore their taxonomic and genetic status through morphological observation, genomic group classification and diversity analysis of talas and rutai banana compared to other recognized and identified bananas in Indonesia, i.e., liar/monyet, Ambon, tanduk and klutuk banana. In total 108 morphological characters were observed on site of growing area using the “Descriptors for Banana (Musa spp.)” morphological indicators. The genome group classification was carried out using Simmonds and Shepherd scoring system toward fifteen key banana characters. The diversity analysis was performed using Hierarchy Cluster Analysis at MINITAB 17.1 software based on the selected characters of the highest Principal Component Analysis (PCA) values. The morphological observation showed that the characters of talas and rutai banana are much closely related to those of belonging to M. acuminata although some characters showed balbisiana-type. In addition, liar/monyet and klutuk banana morphological characters were exactly matched with the M. acuminata and M. balbisiana accessions. Furthermore, most of Ambon banana morphological characters are similar to M. acuminata, but tanduk banana had a combination characters between M. acuminate and M. balbisiana. The genome group classification showed that talas and rutai banana are the AAB genotype, while liar/monyet, Ambon, tanduk, and klutuk were grouped into AA, AAA, AB, and BB genotype, respectively. The diversity analysis showed that talas and rutai banana have a very high similarity about 75% and closed related to AA/AAA genotype i.e., liar/monyet and Ambon with similarities level of 45%.

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Section: Diversity Analysismentioning

confidence: 99%

Genome group classification and diversity analysis of talas and rutai banana, two local cultivars from East Kalimantan, based on morphological characters

2019

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“…Banana is a major tropical fruit crop distributed in more than 120 countries with an annual production of 102 million tonnes. Banana belongs to the family Musaceae under the order of Zingiberales with two genera, Musa L. and Ensete Bruce [1]. It is highly diversified throughout the world but has been reported to originate from Southeast Asia [2].…”

Section: Introductionmentioning

confidence: 99%

Banana Lectin: A Brief Review

Singh

Devi

2014

Molecules

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Abstract:Lectins are a group of proteins of non-immune origin that recognize and bind to carbohydrates without modifying them. Banana is the common name for both herbaceous plants of the genus Musa and for the fruit they produce. They are indeed a promising source for many medicinal applications. Banana lectins have the potential for inhibiting HIV-1 reverse transcriptase activity, suppressing cancer cell proliferation and stimulating macrophage activities. Nevertheless, compared to other plant lectins, there is relatively little information in the literature on banana lectins, particularly with respect to their structure and biological functions. Herein we focus our review on the structure, functions and exploitable properties of banana lectins.

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“…They are diploids or triploids, classified in "groups" according to their A and B-genome composition as AA, AAA, AB, AAB, ABB (De Jesus et al, 2013;Perrier et al, 2011;Pachuau et al, 2014;Hapsari et al, 2015).…”

Section: Contextmentioning

confidence: 99%

The complex distribution of plantain cultivars (Musa sp., AAB subgroup) in the Bas-Uele province of the Democratic Republic of Congo

Losimba¹,

Giria²,

Djailo³

et al. 2018

Afr. J. Agric. Res.

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Plantain is one of the most important sources of food in the African lowlands stretching from the lowlands of Guinea and Liberia to the central basin of the Democratic Republic of Congo (DR Congo). Because plantain cultivars do not produce seeds, plantain cultivation is based on vegetatively transplanted lateral shoots/suckers. The way by which plantain reached the African continent is still under speculation. The aim of this study was to shed light on the history of plantain cultivars through a linguistic/synonymy study in northern Democratic Republic of Congo. We report the diversity of plantains in 18 villages across the Bas-Uele province based on a survey. Three villages in which plantain production systems dominated were selected in each territory, and ten households were consulted in each village. In each selected village, a focus group discussion was conducted with a group of at least 30 men, and with a separate group of 30 women to establish a list of plantain cultivars grown and known. A total of 46 cultivars were identified and 294 synonyms detected. The cultivar names are mostly related to animal features and agronomic traits, although there is a need to revisit the list for more specific traditional names. The local differences in cultivar identity, density and distribution are explained partly due to the influence of humid forest versus savanna landscapes, but the main part seems to be due to previous movements of Benza, Boa, Ngbandi, Rambo and Zande ethnic groups with their own set of cultivars. We demonstrate that the recorded synonymy data are useful for a tentative partial reconstruction of the history of some cultivars. This is useful for the genetic improvement of plantain cultivars, which most probably will have to rely for a great deal on the unraveling and management of epigenetic mechanisms.

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Genome Classification of Musa cultivars from Northeast India as Revealed by ITS and IRAP Markers

Cited by 16 publications

References 24 publications

Genome group classification and diversity analysis of talas and rutai banana, two local cultivars from East Kalimantan, based on morphological characters

Genome group classification and diversity analysis of talas and rutai banana, two local cultivars from East Kalimantan, based on morphological characters

Banana Lectin: A Brief Review

The complex distribution of plantain cultivars (Musa sp., AAB subgroup) in the Bas-Uele province of the Democratic Republic of Congo

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