45Sex is often hailed as one of the major successes in evolution, and in sexual 46 organisms the maintenance of proper sex ratio is crucial. As a large unicellular 47 eukaryotic lineage, ciliates exhibit tremendous variation in mating systems, 48 especially the number of sexes and the mechanism of sex determination (SD), and 49 yet how the populations maintain proper sex ratio is poorly understood. Here 50Tetrahymena thermophila, a ciliate with seven mating types (sexes) and probabilistic 51 SD mechanism, is analyzed from the standpoint of population genetics. It is found 52 based on a newly developed population genetics model that there are plenty of 53 opportunities for both the co-existence of all seven sexes and the fixation of a single 54 sex, pending on several factors, including the strength of natural selection. To test 55 the validity of predictions, five experimental populations of T. thermophila were 56 maintained in the laboratory so that the factors that can influence the dynamics of 57 sex ratio could be controlled and measured. Furthermore, whole-genome 58 sequencing was employed to examine the impact of newly arisen mutations. Overall, 59 it is found that the experimental observations highly support theoretical predictions. 60It is expected that the newly established theoretical framework is applicable in 61 principle to other multi-sex organisms to bring more insight into the understanding 62 of the maintenance of multiple sexes in a natural population. 63 64 Key words: ciliate, multi-sex system, sex ratio, experimental evolution 65 66 organisms and will provide more insight into the understanding of the maintenance 130 of multiple sexes in natural populations. 131 132 133 134 135 136 Materials and Methods 137