Genetic Variation in Damaged Populations of Pistacia atlantica Desf.

Labdelli, Amina; Herrán, Roberto de la; Arafeh, Rami; Resentini, Francesca; Trainotti, Livio; Halis, Youcef; Adda, Ahmed; Merah, Othmane

doi:10.3390/plants9111541

Cited by 11 publications

(4 citation statements)

References 39 publications

(56 reference statements)

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“…A diversity analysis of Jasminum was also performed on the collected variants using ISSR markers, which showed the intraspecific and interspecific variations and the relationship among the sections. Many studies have validated the use of ISSR markers for genomic characterization in the Oleaceae family [ 23 , 24 , 25 , 26 ] and many other plants, such as Batrachium [ 27 ], Pistacia [ 28 ], and Aerva [ 29 ].…”

Section: Discussionmentioning

confidence: 99%

ISSR-Based Genetic Diversity Assessment of Genus Jasminum L. (Oleaceae) from Pakistan

Akhtar

Hafiz

Hayat

et al. 2021

Plants

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The genus Jasminum L., of the family Oleaceae, includes many species occurring in the wild, or cultivated worldwide. A preliminary investigation based on inter-simple sequence repeats (ISSR) was performed to assess the genetic diversity among 28 accessions, representing nine species of Jasminum from various regions, representing a range of altitudes in Pakistan. A total of 21 ISSR primers were used, which produced 570 amplified bands of different sizes, with a mean polymorphic band percentage of 98.26%. The maximum resolving power, polymorphism information content, and index values of the ISSR markers recorded for primers 6, 16, and 19 were 0.40, 12.32, and 24.21, respectively. Based on the data of the ISSR markers, the resulting UPGMA dendrogram with the Jaccard coefficient divided the 28 accessions into two main clades. At the species level, the highest values for Shannon’s information index, polymorphism percentage, effective allele number, Nei’s genetic variations, and genetic unbiased diversity were found in Jasminum sambac L. and J. humile L., while the lowest were observed in J. mesnyi Hance and J. nitidum Skan. Based on Nei’s unbiased genetic identity pairwise population matrix, the maximum identity (0.804) was observed between J. elongatum Willd and J. multiflorum (Burm. f.) Andrews, and the lowest (0.566) between J. nitidum Skan. and J. azoricum L. Molecular variance analysis displayed a genetic variation of 79% among the nine populations. The study was aimed to established genetic diversity in Jasminum species using ISSR markers. With the help of this technique, we were able to establish immense intra- and interspecific diversity across the Jasminum species.

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Section: Discussionmentioning

confidence: 99%

ISSR-Based Genetic Diversity Assessment of Genus Jasminum L. (Oleaceae) from Pakistan

Akhtar

Hafiz

Hayat

et al. 2021

Plants

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“…In Algeria, several endemic species are found to be distributed over the territory which, includes the Atlas Pistachio (Pistacia atlantica Desf. ), the Terebinth Pistachio (Pistacia terebinthus L.), the Lentiscus Pistachio (Pistacia lentiscus L.), and the Fruit Pistachio (Pistacia vera L.) (Labdelli et al 2020).…”

Section: Introductionmentioning

confidence: 99%

Cartography and spatial distribution of the genus Pistacia in Souk Ahras, Northeast Algeria

BAROUR

TAOUARFIA

2022

Biodiversitas

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Abstract. Barour AA. 2021. Cartography and spatial distribution of the genus Pistacia in Souk Ahras, Northeast Algeria. Biodiversitas 23: 286-290. In 2020, a study mapped two species of the genus Pistacia, viz. Pistacia atlantica Desf. and Pistacia vera L. in the Wilaya of Souk Ahras situated in the northeast of Algeria. The study was based on the determination of the geographic coordinates of each individual and mapping their spatial distribution by using MapInfo Pro 12.0.2 software. The results showed that Atlas Pistachio was mainly distributed over four localities viz. Batoum, Ben Attia, Sidi Fredj and Ouled Moumen. However, the Pistachio nut species were distributed over two localities in the south of the Wilaya of Souk Ahras, viz. Ben Attia and Sidi Fredj. The locality of Ben Attia was characterized by a more or less random distribution of trees, mostly young plants. At thr same time, the structure was heterogeneous across the other stations, with the dominance of large and old trees. The spacing between the trees of the Atlas Pistachio varied from one region to another, ranging from 3 to 189 m. At the Ouled Moumen area, the distribution of wild Pistachio trees formed circles with very close distances between neighboring feet. On the other hand, the trees were spaced and distributed in a linear manner across the other stations.

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“…), four species are endangered and eleven species are vulnerable in Indonesia. The rich diversity of the Anacardiaceae family provides vital ecosystem services, such as food, yet genetic information for its species conservation and utilization is insufficient (Labdelli et al 2020).The current problem related to Anacardiaceae's conservation effort is to obtain a quick, precise, and accurate morphological identification of the specimens (Herrera et al 2018;Santos et al 2021). The morphology-based plant species identification was carried out by analyzing all parts of intact specimens, including flowers and fruits, which are seasonally available (Hassoon et al 2018;Wäldchen et al 2018).…”

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An Early Reference to DNA Barcode for the Anacardiaceae Family

Ryadi¹,

Siregar²,

Moura³

et al. 2023

HAYATI J Biosci

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Anacardiaceae is well-known for its edible fruits and economically important species in Indonesia. Approximately 3% of Indonesia's endangered and vulnerable species belong to this family. Fast and accurate species identification is crucial to support the conservation efforts for this family, such as employing DNA sequences. Species identification using DNA sequences, known as DNA barcoding, has been widely used in many applied fields. So far, the application of DNA barcoding for Anacardiaceae plant species is limited to several genera only, such as Mangifera and Spondias. This research aimed to enrich the DNA barcode references of Anacardiaceae and to evaluate the most suitable and effective genetic marker as DNA barcodes to identify species of 35 samples representing sixteen species of the Anacardiaceae family using chloroplast markers matK and rbcL as barcode regions. When comparing the morphological identification with the molecular assignments, the barcode accuracy was 62.50% (matK), 60.61% (rbcL), and 73.33% (matK+rbcL) at the genus level. All the markers failed to show a barcoding gap, even though the t-test showed that the intraspecific and interspecific genetic distances were significantly different for matK and rbcL+matK. Among others, Gluta walichii (Hook.f.) Ding Hou and Melanochyla caesia Jack were the only species successfully resolved by all markers. Nevertheless, new DNA barcodes of six Anacardiaceae species were made available by this study, enriching the genetic references of tropical flora diversity.

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Genetic Variation in Damaged Populations of Pistacia atlantica Desf.

Cited by 11 publications

References 39 publications

ISSR-Based Genetic Diversity Assessment of Genus Jasminum L. (Oleaceae) from Pakistan

ISSR-Based Genetic Diversity Assessment of Genus Jasminum L. (Oleaceae) from Pakistan

Cartography and spatial distribution of the genus Pistacia in Souk Ahras, Northeast Algeria

An Early Reference to DNA Barcode for the Anacardiaceae Family

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