2015
DOI: 10.1253/circj.cj-15-0536
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Genetic Variation in Cardiomyopathy and Cardiovascular Disorders

Abstract: With the wider deployment of massively parallel, next generation sequencing, it is now possible to survey human genome data for research and clinical purposes. The reduced cost of producing short read sequencing has now shifted the burden to data analysis. Analysis of genome sequencing remains challenged by the complexity of the human genome, including redundancy and the repetitive nature of genome elements and the large amount of variation in individual genomes. Public databases of human genome sequence great… Show more

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Cited by 23 publications
(11 citation statements)
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“…Even with next-generation sequencing and larger panels, the sensitivity for detecting the DCM-causing mutation may only reach 50%. More is not necessarily better as broad-based sequencing approaches (online supplementary table 2) may generate uncertainty by uncovering more novel variants of uncertain significance 24. Judging the relevance of such novel variations can be helped by screening families (see next section) so that with time, information on most of the mutations coupled with data from mechanism studies, will become available in databases linking to clinical phenotypes.…”
Section: Diagnosticsmentioning
confidence: 99%
“…Even with next-generation sequencing and larger panels, the sensitivity for detecting the DCM-causing mutation may only reach 50%. More is not necessarily better as broad-based sequencing approaches (online supplementary table 2) may generate uncertainty by uncovering more novel variants of uncertain significance 24. Judging the relevance of such novel variations can be helped by screening families (see next section) so that with time, information on most of the mutations coupled with data from mechanism studies, will become available in databases linking to clinical phenotypes.…”
Section: Diagnosticsmentioning
confidence: 99%
“…The persistence of a thin compact myocardium with deep intertrabecular recesses is termed ventricular non-compaction in mice, and left ventricular non-compaction (LVNC) in humans. 3-6 LVNC is a relatively common and severe genetic cardiomyopathy, [7][8][9][10] in which approximately 50% of patients show biventricular involvement. 4,11, 12 Often, transgenic mice have been utilized to study LVNC.…”
mentioning
confidence: 99%
“…Further, combination of gene expression analysis and clinical phenotypic assessments are necessary to uncover unknown modifier genes in HCM patients (Han et al, 2014). The development of online databases for HCM variants could aid physicians in the timing and implementation of electrical or surgical treatment options (McNally and Puckelwartz, 2015). As mentioned in the preceding sections, inclusion of ethnicity data in such databases has important genetic consequences and thus is clinically relevant.…”
Section: Current Efforts Toward Precision Medicine For Hcmmentioning
confidence: 99%