2020
DOI: 10.13057/biodiv/d210530
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Genetic variability of Indonesian Oryctes rhinoceros nudivirus (OrNV) as genus of Alphanudivirus

Abstract: Abstract. Rahayuwati S, Kusumah YM, Prawirosukarto S, Dadang, Santoso T. 2020. Genetic variability of Indonesian Oryctes rhinoceros nudivirus (OrNV) as genus of Alphanudivirus. Biodiversitas 21: 2047-2055. Oryctes rhinoceros nudivirus (OrNV) is known as a successful classical biological control agent. Recent reports have revealed differences in pathogenicity among OrNV isolates, with correlation suspected between virus virulence and genetic variability. The aim of the research is to study the genetic variabili… Show more

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Cited by 4 publications
(5 citation statements)
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“…Infection periods and mortality rates of CRB larvae differed after infection with OrNV isolates from the Philippines and Western Samoa ( Zelazny 1977 ). Similarly, genetic variability of OrNV isolates sampled from different locations within Malaysia and Indonesia are also reported ( Ramle et al 2005 , Rahayuwati et al 2020 ). Therefore, improved understanding of interactions between CRB and entomopathogens (e.g., OrNV, Metarhizium ) in different regions are especially important for development and implementation of targeted region-specific biological control programs.…”
Section: Managing the New Wave Of Crb Invasion Using Bcas: Future Permentioning
confidence: 91%
“…Infection periods and mortality rates of CRB larvae differed after infection with OrNV isolates from the Philippines and Western Samoa ( Zelazny 1977 ). Similarly, genetic variability of OrNV isolates sampled from different locations within Malaysia and Indonesia are also reported ( Ramle et al 2005 , Rahayuwati et al 2020 ). Therefore, improved understanding of interactions between CRB and entomopathogens (e.g., OrNV, Metarhizium ) in different regions are especially important for development and implementation of targeted region-specific biological control programs.…”
Section: Managing the New Wave Of Crb Invasion Using Bcas: Future Permentioning
confidence: 91%
“…6 ) 15 , 16 . This clade was part of a larger clade containing the Palau1 and LiboV isolates, as well as DNA polymerase sequences from two of a set of nine Indonesian isolates 17 .
Figure 6 Relationships among OrNV isolates inferred from alignment of DNA polymerase nucleotide sequences.
…”
Section: Resultsmentioning
confidence: 99%
“…To infer the relationships among OrNV isolates on the basis of nucleotide sequence alignments, the DNA polymerase ORFs of completely sequenced isolates (Table 2 ), OrNV-PV505 16 , and a set of nine isolates from Indonesia 17 were aligned by MUSCLE as implemented in Lasergene MegAlign Pro v. 17 (DNAStar). Phylogeny was inferred by maximum likelihood using MEGA X 28 with the Tamura-Nei (TN93) model 41 , with ambiguous data eliminated prior to analysis.…”
Section: Methodsmentioning
confidence: 99%
“…6) 15,16 . This clade was part of a larger clade containing the Palau and LiboV isolates, as well as DNA polymerase sequences from two of a set of nine Indonesian isolates 17 .…”
Section: Genome Sequencesmentioning
confidence: 99%
“…To infer the relationships among OrNV isolates on the basis of nucleotide sequence alignments, the DNA polymerase ORFs of completely sequenced isolates (Table 2), OrNV-PV505 (Wang et al, 2007), and a set of nine isolates from Indonesia (Rahayuwati et al, 2020) were aligned by MUSCLE as implemented in Lasergene MegAlign Pro v. 17 (DNAStar). Phylogeny was inferred by maximum likelihood using MEGA X 28 with the Tamura-Nei (TN93) model 41 OrNV-Solomon Islands MN623374…”
Section: Phylogenetic Inferencementioning
confidence: 99%