Notch-mediated induction of Nodal at the vertebrate node is a critical step in initiating left-right (LR) asymmetry. In mice and zebrafish we show that Baf60c, a subunit of the Swi/Snf-like BAF chromatin remodeling complex, is essential for establishment of LR asymmetry. Baf60c knockdown mouse embryos fail to activate Nodal at the node and also have abnormal node morphology with mixing of crown and pit cells. In cell culture, Baf60c is required for Notch-dependent transcriptional activation and functions to stabilize interactions between activated Notch and its DNA-binding partner, RBP-J. Brg1 is also required for these processes, suggesting that BAF complexes are key components of nuclear Notch signaling. We propose a critical role for Baf60c in Notch-dependent transcription and LR asymmetry.chromatin ͉ Swi/Snf ͉ node T he bodies of all vertebrates are asymmetric on the left and right sides, resulting in distinct situs of organs, such as the left-pointing heart. Proper regulation of left-right (LR) asymmetry is necessary for normal organ positioning during embryonic development (1, 2). Strong genetic and cell biologic evidence in mammals suggests that the critical events in breaking symmetry take place at the node, an important organizer structure of the vertebrate embryo. These symmetry-breaking events include the asymmetric movement of fluids across the node (so-called nodal flow) and the Notch pathway-dependent activation of the secreted protein Nodal in cells surrounding the node (1-7). This is followed by a cascade of secreted factors and transcription factors restricted to the left side of the embryo, establishing left-sided identity and organ situs (1, 2).The Swi/Snf-like BAF chromatin remodeling complexes are important regulators of transcription during development (8). BAF complexes are large multisubunit assemblies that are characterized by polymorphic components; e.g., the core ATPase of the complexes can be either Brahma (Brm) or Brahma-related gene 1 (Brg1) (8-