Genetic population study of Y-chromosome markers in Benin and Ivory Coast ethnic groups

Fortes-Lima, César; Brucato, Nicolas; Croze, Myriam; Bellis, Gil; Schiavinato, Stéphanie; Massougbodji, Achille; Migot-Nabias, Florence; Dugoujon, Jean‐Michel

doi:10.1016/j.fsigen.2015.07.021

Cited by 7 publications

(5 citation statements)

References 35 publications

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“…Nowadays, haplogroup R-V88 is still often reported on Sardinia (Italy) and Corsica (France) islands, virtually the last places in Europe preserving this lineage [ 60 , 64 , 65 , 66 ]. In a network assembled using African and European haplotypes, one of the two R-V88 chromosomes presents a similar haplotype to European samples ( Supplementary Figure S4 ) [ 31 , 52 , 53 , 54 , 56 , 59 , 67 , 68 ]. The other R-V88 haplotype shows no clear similarities to the European and African haplotypes.…”

Section: Resultsmentioning

confidence: 99%

Tierra Del Fuego: What Is Left from the Precolonial Male Lineages?

Rodrigues

Velázquez

Ribeiro³

et al. 2022

Genes

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Similar to other South American regions, Tierra del Fuego has an admixed population characterized by distinct ancestors: Native Americans who first occupied the continent, European settlers who arrived from the late 15th century onwards, and Sub-Saharan Africans who were brought to the Americas for slave labor. To disclose the paternal lineages in the current population from Tierra del Fuego, 196 unrelated males were genotyped for 23 Y-STRs and 52 Y-SNPs. Haplotype and haplogroup diversities were high, indicating the absence of strong founder or drift events. A high frequency of Eurasian haplogroups was detected (94.4%), followed by Native American (5.1%) and African (0.5%) ones. The haplogroup R was the most abundant (48.5%), with the sub-haplogroup R-S116* taking up a quarter of the total dataset. Comparative analyses with other Latin American populations showed similarities with other admixed populations from Argentina. Regarding Eurasian populations, Tierra del Fuego presented similarities with Italian and Iberian populations. In an in-depth analysis of the haplogroup R-M269 and its subtypes, Tierra del Fuego displayed a close proximity to the Iberian Peninsula. The results from this study are in line with the historical records and reflect the severe demographic change led mainly by male newcomers with paternal European origin.

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Section: Resultsmentioning

confidence: 99%

Tierra Del Fuego: What Is Left from the Precolonial Male Lineages?

Rodrigues

Velázquez

Ribeiro³

et al. 2022

Genes

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“…Other African studies have reported genetic differentiation between ethnic groups separated by political borders. One of such studies, Fortes-Lima, et al, [6] reported a genetic differentiation between the Nigerian and Beninese Yoruba. The researchers genotyped 288 male samples from Benin and Ivory Coast using the Yfiler™ kit and compared the results to published data from the region.…”

Section: Resultsmentioning

confidence: 99%

Haplogroup prediction in the Ghanaian population using haplotype data of 27 Yfiler® Plus loci and TaqMan SNP genotyping

Wepeba¹,

Abaidoo²,

Goodwin³

2022

Forensic Science International: Genetics Supplement Series

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“…The populations Fon, Bariba, Yoruba, Ahizi and Yacouba were genotyped using 96 Y-SNPs on a BioMark™ HD system (Fluidigm, USA) as described in (Fortes-Lima et al, 2015). Y-SNP haplogroups were assigned according to ISOGG Y-DNA Haplogroup Tree 2015 (http://www.isogg.org/tree/) updated in April 2015.…”

Section: J O U R N a L P R E -P R O O F 8 Snp Genotyping Methodsmentioning

confidence: 99%

Predicting haplogroups using a versatile machine learning program (PredYMaLe) on a new mutationally balanced 32 Y-STR multiplex (CombYplex): Unlocking the full potential of the human STR mutation rate spectrum to estimate forensic parameters

Bouakaze

Delehelle

Sáenz-Oyhéréguy

et al. 2020

Forensic Science International: Genetics

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HAL is a multidisciplinary open access archive for the deposit and dissemination of scientific research documents, whether they are published or not. The documents may come from teaching and research institutions in France or abroad, or from public or private research centers. L'archive ouverte pluridisciplinaire HAL, est destinée au dépôt et à la diffusion de documents scientifiques de niveau recherche, publiés ou non, émanant des établissements d'enseignement et de recherche français ou étrangers, des laboratoires publics ou privés.

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Genetic population study of Y-chromosome markers in Benin and Ivory Coast ethnic groups

Cited by 7 publications

References 35 publications

Tierra Del Fuego: What Is Left from the Precolonial Male Lineages?

Tierra Del Fuego: What Is Left from the Precolonial Male Lineages?

Haplogroup prediction in the Ghanaian population using haplotype data of 27 Yfiler® Plus loci and TaqMan SNP genotyping

Predicting haplogroups using a versatile machine learning program (PredYMaLe) on a new mutationally balanced 32 Y-STR multiplex (CombYplex): Unlocking the full potential of the human STR mutation rate spectrum to estimate forensic parameters

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