Genetic and molecular variability of aTurnip mosaic virus population from horseradish (Cochlearia armoracia L.)

Kozubek, Edward; Irzykowski, Witold; Lehmann, P.

doi:10.1007/bf03195226

Cited by 12 publications

(6 citation statements)

References 36 publications

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“…TuMV probably occurs worldwide and has been found in both temperate and subtropical regions of Africa, Asia, Europe, Oceania and North and South America (Ohshima et al., ; Provvidenti, ; Schwinghamer et al., ). In Europe, TuMV was reported from the United Kingdom (Pallett et al., ), Spain (Segundo et al., ), Italy (Guglielmone et al., ; Ohshima et al., ), Greece (Jenner & Walsh, ; Tomimura et al., ), Germany (Tomimura, Gibbs, Jenner, Walsh, & Ohshima, ), the Netherlands (Ohshima et al., ), Czech Republic (Petrzik & Lehmann, ), Hungary (Horvath, Juretic, Besada, & Mamula, ), Bulgaria (Kovachevsky, ), Poland (Kozubek, Irzykowski, & Lehmann, ) and Russia (Ohshima et al., ).…”

Section: Introductionmentioning

confidence: 99%

“…1996; Schwinghamer et al, 2014). In Europe, TuMV was reported from the United Kingdom (Pallett et al, 2008), Spain (Segundo et al, 2003), Italy (Guglielmone et al, 2000;Ohshima et al, 2002), Greece (Jenner & Walsh, 1996;Tomimura et al, 2004), Germany (Tomimura, Gibbs, Jenner, Walsh, & Ohshima, 2003), the Netherlands (Ohshima et al, 2002), Czech Republic (Petrzik & Lehmann, 1996), Hungary (Horvath, Juretic, Besada, & Mamula, 1975), Bulgaria (Kovachevsky, 1975), Poland (Kozubek, Irzykowski, & Lehmann, 2007) and Russia (Ohshima et al, 2002).…”

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confidence: 99%

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First evidence of the occurrence of Turnip mosaic virus in Ukraine and molecular characterization of its isolate

Shevchenko

Yasaka

Tymchyshyn

et al. 2018

Journal of Phytopathology

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A total of 54 samples of Brassicaceae crops showing symptoms of mosaic, mottling, vein banding and/or leaf deformation were collected in Kyiv region (northern central part of Ukraine) in 2014–2015. A half of collected samples was found to be infected with Turnip mosaic virus (TuMV), and TuMV was detected in samples from Brassica oleracea var. capitata (cabbage), Raphanus sativus, Brassica juncea, Raphanus sp., Sinapis alba, Camelina sativa and Bunias orientalis (weed). The full‐length sequence of the genomic RNA of a Ukrainian isolate (UKR9), which was isolated from cabbage, was determined. Recombination analysis of UKR9 isolate showed that this isolate was an interlineage recombinant of world‐Brassica and Asian‐Brassica/Raphanus phylogenetic groups. This study shows for the first time the occurrence of TuMV in Ukraine.

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Section: Introductionmentioning

confidence: 99%

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confidence: 99%

First evidence of the occurrence of Turnip mosaic virus in Ukraine and molecular characterization of its isolate

Shevchenko

Yasaka

Tymchyshyn

et al. 2018

Journal of Phytopathology

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“…Finally, no 'clear' recombination (p value of <1×10 −6 ) was found in the genome of IRN SS5 and IRN TRa6 and the isolates seemed not to be recombinants. On the other hand, the full genomic nucleotide sequences of two Polish isolates of CAR37 (DQ648592) and CAR39 (EF374098), recently deposited in the international gene sequence databases (Kozubek et al 2007), were found to have recombination sites in P1 and P3 genes, respectively; a recombination site in the middle of P1 gene of CAR37 isolate was detected by p values using the RDP (5. of the RDP3 software. These two sites were 'clear' intralineage (parental sequences from identical major genogroup) recombination sites of world-B parents.…”

Section: Identification Of Recombinantsmentioning

confidence: 99%

Molecular characterisation of Turnip mosaic virus isolates from Brassicaceae weeds

et al. 2008

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Eight provinces of Iran were surveyed during 2003-2008 to find Brassicaceae reservoir weed hosts of Turnip mosaic virus (TuMV). A total of 532 weed samples were collected from plants with virus-like symptoms. The samples were tested for the presence of TuMV by enzyme-linked immunosorbent assay using specific antibodies. Among those tested, 340 samples (64%) were found to be infected with TuMV. Rapistrum rugosum, Sisymberium loeselii, S. irio and Hirschfeldia incana were identified as the Brassicaceae weed hosts of TuMV, and the former two plant species were found to be the most important weed hosts for the virus in Iran. The full-length sequences of the genomic RNAs of IRN TRa6 and IRN SS5 isolates from R. rugosum and S. loeselii were determined. No evidence of recombination was found in both isolates using different recombination-detecting programmes. Phylogenetic analyses of the weed isolates with representative isolates from the world showed that the IRN TRa6 and IRN SS5 isolates fell into an ancestral basalBrassica group. This study shows for the first time the wide distribution and phylogenetic relationships of TuMV from weeds in the mid-Eurasia of Iran.

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“…TuMV probably occurs worldwide and has been found in both temperate and subtropical regions of Africa, Asia, Europe, Oceania and North and South America (Provvidenti, 1996;Ohshima et al, 2002;Schwinghamer et al, 2014). In Europe, TuMV was reported from the UK (Pallett et al, 2008), Spain (Segundo et al, 2003), Italy (Guglielmone et al, 2000, Ohshima et al, 2002, Greece (Jenner, Walsh, 1996;Tomimura et al, 2004), Germany (Tomimura et al, 2003), The Netherlands, Czech Republic (Petrzik, Lehmann, 1996), Hungary (Horvath et al, 1975), Bulgaria (Kovachevsky, 1975), Poland (Kozubek et al, 2007), and Russia (Ohshima et al, 2002;Zubareva et al, 2012). Ukraine is one of the largest European countries enjoying strategic logistic position at the doorstep of the Northern Silk Road, between the eastern EU states and Black Sea/Middle East region, where TuMV was also recently detected in Turkey (Korkmaz et al, 2008) and Iran (Farzadfar et al, 2009).…”

Section: Introductionmentioning

confidence: 99%

Traditional Cultivation Practices May Efficiently Prevent the Virus Spread in Susceptible Crops: A Case Study of Turnip Mosaic Virus in Ukraine

Shevchenko¹,

Tymchyshyn²,

Shevchenko³

2018

AGR

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Turnip mosaic virus (TuMV) is a member of the largest Potyviridae family of plantviruses. For domesticated Brassica plants, TuMV is considered one of the mostdamaging and economically important viruses. TuMV is mainly transmitted bymany aphid species non-persistently as well as mechanically from plant to plant.TuMV probably occurs worldwide and has been found in both temperate andsubtropical regions of Africa, Asia, Europe, Oceania and North and SouthAmerica. In Europe, TuMV was reported from the UK, Spain, Italy, Greece,Germany, The Netherlands, Czech Republic, Hungary, Bulgaria, Poland, andRussia. Despite Ukraine geographical location and wide cultivation of differentBrassica crops for centuries, it has been only recently that the authors haveregistered TuMV in this country. In this study, isolates of TuMV were collected inUkraine from naturally infected host plants, all from Brassicaceae family. For thefirst time, TuMV was shown to be widespread in agricultural and urban regions inUkraine where it naturally infects crops, weeds and introduced species withinfection rate reaching 50%. Also, we show that urban locations and concomitantweed plants are potent factors of virus epidemiology favoring extremely high virusincidence level of 89% in susceptible hosts. Importantly, we underpin thesignificance of trivial cultivation practices (crop rotation and eradication ofdiseased plants) as preventive measures for the control of damaging pathogen ofbrassicas, allowing for 3 times less TuMV incidence.

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Genetic and molecular variability of aTurnip mosaic virus population from horseradish (Cochlearia armoracia L.)

Cited by 12 publications

References 36 publications

First evidence of the occurrence of Turnip mosaic virus in Ukraine and molecular characterization of its isolate

First evidence of the occurrence of Turnip mosaic virus in Ukraine and molecular characterization of its isolate

Molecular characterisation of Turnip mosaic virus isolates from Brassicaceae weeds

Traditional Cultivation Practices May Efficiently Prevent the Virus Spread in Susceptible Crops: A Case Study of Turnip Mosaic Virus in Ukraine

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